Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03114 ATGGCTGACCCAATCCTCTCCGATCAACCACCGGAACAACAACCGTCGTCCGATCTCGATTACGACTTCGCCGGCCAATTCAACAACGTCCCTATCCCTTCATTTGATTTTTTATTCAACGACGATCTTGGAGATCTTGAGATCACGTTCGACGATCTGGATAATCTCTGTATCCCTTCTGATACCGAAGATTTTCTTCTTCCCGATTCATGGAACCCTAACGGTGTCCCAGTTTCGCCTATCATTGATAATAATCAAGGCGATGTTAATTTTGATTCGCCGGAATCAGGTGCTTCTGTTGTTTCCGGTGATCAGAGTCCAGATGTTTCTAGGTTTCTCAATTCAGATTCGGTTTCTGCTGATGATAATGATAATTCAGTTGATGTTGATGTTAAAGTTTCGACGGAGACTGAAAATGCTGAGAATTCTGACCGGGAAGAGTCTTCGAATGGACCGGTTTCGTCTCAGGGATCAGGGAACGGCGGATCGGGTGTATATGAAGCGATGAATTCGCCCTCACATGATTCTGGCCGTTATGAGAGGGATATTTCATCTTCCCATGAACATGCAACTGTGGAAGAGGGTGTGAAATTGGAAGGAATTGTTAAAGGATGTGATCTGAAGAGGAAGAAAGAAAGTAGCCATGAAAGTGCTGAGACTCGAACTCCGAAATGTAGCAGGAGATCCTCTTCAATGGAAATCAAGACCCAGCAACAACAACAACAGCAACAAGCTCAATCTCAATCTGGTTTTGATGGTATTGAAGATGAGGATGAGAAGAGGAAGGCAAGGTTGATGAGGAATAGAGAAAGTGCACAGCTTTCTAGGCAGAGGAAGAAGCATTATGTGGAGGAGCTTGAGGAGAAGGTAAGATCAATGCATTCAACAATTGCTGATTTGAGTAGCAAGATTACATATGTTATGGCTGAGAATGCTACACTTAGACAACAATTGAGTGGTGGTGTGATGTGTCCACCACCTCCGCCGGGTGCTGGGATGTACCCTCATCCTCCAATGGCACCCATGCCTTATCCATGGATGCCTTGTGCTCCTTATGTTGTTAAACCTCAAGGTTCTCAGGTTCCTTTGGTCCCAATTCCAAGGTTAAAGCCTCAGCAACCAGCTGCGTCTTCCAAGAGTAAAAAGAGTGAGAGTAAGAAAACTGAGGTGAAAACTAAGAAGGTTGCTAGTATTAGTTTGTTGGGTTTGTTTTTCTGTATTATGCTTTTTGGTGGACTTGTTCCTATGGTAGATTTTAAGTTTGGAGGTTTAGTTGATAATGTTTCTGGTAGGTCTAGTTATGTTAGTGATAGATGGTTTTATGGTCATGGTGGAGGGAAGATTTGGCCTGTAAATGGTCATATGAATGAATCTGGAAGGGATGGAGAAGTGGGGTCTCCCAATGGAAGGTTTGGTATTTCCGATAGGAATAATTATGAAAGAGGTCGGAAACTAGGAGAAGAAATGAATGAACGGAAAGACTCGAGTTGTTTTGGTCATCGAGACAATGCCAGCGAGCCACTTCTAGCTTCTTTGTATGTTCCTAGGAATGATAAGCTGGTGAAGATTGATGGAAACTTGATAATCCATTCTATTATGGCCAGTGAGAAAGCCAAGGCATCTCAAGATGCTCAGGTAAAGAAGGAGAAGAGTGGAACTGGTTTGGCCATTCCTAAAGATTGGGATTCTGCATTGGCTATTCCTGAAGTTGGAAGAAATAGAGGACAGCATCCAAATGTGTACAAAGTTTCTGCAGAACAGAGGAGGGCTATTGGCTCTGGTTCAGCTAAAACATTGAAGGACCATATGAAGTCTTCTGCAACTGATGGTAAAATGCAGCAGTGGTTCCGTGAAGGAATTGCAGGTCCAATGCTAAGTTCTGGCATGTGTACTGAAGTTTTTCAGTTTGATGTTTCTCCCGCTCCTGGAGCTATTGTTCCAGCAACTGCAGTGGGCAATATTTCTACTGAAACTCGTCGTAATGCCACCAATATCAACAAGAGCAGGAACAGAAGAATCCTCCACACCCTCCCAGATCCACTTCCTGGAACCCGTCTGAACATAACTGAAGAACATGCAAGAAATTTGCCGAAAGACCACCTCCCTGGTAATAAATCGTCTATGGTGGTTTCTGTGCTTGTTGATCCAAAAGAGGACAGTGATGTTGATGGAATGATGGCTCCAAAGTCGCTCTCTCGGATTTTCGTGGTCGTGCTAATAGATAGTGTCAAGTATGTGACTTATTCATGTGGTCTTCCCCGCGCTTCTCCTTTGGTGACTGCTTATGTTTGA 2292 0.4376 MADPILSDQPPEQQPSSDLDYDFAGQFNNVPIPSFDFLFNDDLGDLEITFDDLDNLCIPSDTEDFLLPDSWNPNGVPVSPIIDNNQGDVNFDSPESGASVVSGDQSPDVSRFLNSDSVSADDNDNSVDVDVKVSTETENAENSDREESSNGPVSSQGSGNGGSGVYEAMNSPSHDSGRYERDISSSHEHATVEEGVKLEGIVKGCDLKRKKESSHESAETRTPKCSRRSSSMEIKTQQQQQQQQAQSQSGFDGIEDEDEKRKARLMRNRESAQLSRQRKKHYVEELEEKVRSMHSTIADLSSKITYVMAENATLRQQLSGGVMCPPPPPGAGMYPHPPMAPMPYPWMPCAPYVVKPQGSQVPLVPIPRLKPQQPAASSKSKKSESKKTEVKTKKVASISLLGLFFCIMLFGGLVPMVDFKFGGLVDNVSGRSSYVSDRWFYGHGGGKIWPVNGHMNESGRDGEVGSPNGRFGISDRNNYERGRKLGEEMNERKDSSCFGHRDNASEPLLASLYVPRNDKLVKIDGNLIIHSIMASEKAKASQDAQVKKEKSGTGLAIPKDWDSALAIPEVGRNRGQHPNVYKVSAEQRRAIGSGSAKTLKDHMKSSATDGKMQQWFREGIAGPMLSSGMCTEVFQFDVSPAPGAIVPATAVGNISTETRRNATNINKSRNRRILHTLPDPLPGTRLNITEEHARNLPKDHLPGNKSSMVVSVLVDPKEDSDVDGMMAPKSLSRIFVVVLIDSVKYVTYSCGLPRASPLVTAYV 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03114 763 MobiDBLite consensus disorder prediction 9 23 - -
Trre13g03114 763 MobiDBLite consensus disorder prediction 253 276 - -
Trre13g03114 763 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 38 758 - -
Trre13g03114 763 FunFam bZIP transcription factor 49 259 321 - -
Trre13g03114 763 Coils Coil 283 303 - -
Trre13g03114 763 MobiDBLite consensus disorder prediction 363 391 - -
Trre13g03114 763 MobiDBLite consensus disorder prediction 174 228 - -
Trre13g03114 763 CDD bZIP_HY5-like 261 312 - -
Trre13g03114 763 MobiDBLite consensus disorder prediction 146 170 - -
Trre13g03114 763 SUPERFAMILY Leucine zipper domain 260 318 IPR046347 GO:0003700|GO:0006355
Trre13g03114 763 MobiDBLite consensus disorder prediction 77 124 - -
Trre13g03114 763 MobiDBLite consensus disorder prediction 69 276 - -
Trre13g03114 763 MobiDBLite consensus disorder prediction 229 251 - -
Trre13g03114 763 Pfam bZIP transcription factor 259 318 IPR004827 GO:0003700|GO:0006355
Trre13g03114 763 SMART brlzneu 256 320 IPR004827 GO:0003700|GO:0006355
Trre13g03114 763 MobiDBLite consensus disorder prediction 1 23 - -
Trre13g03114 763 Gene3D - 258 320 - -
Trre13g03114 763 MobiDBLite consensus disorder prediction 125 145 - -
Trre13g03114 763 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 258 318 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03114 Trre-Chr13 37182332 37185365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g03114 1 761 bZIP Transcription Factor Family AT2G40950 47.727 5.25e-172 510
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trre13g03114 bZIP_1 9.6e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03114 K25783 - gmx:100101871 867.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g03114 13 37182332 37185365 Trre13g03114 13 37182332 37185365 ECH