Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03085 ATGGCTCTGTTTCTCACAATACCTCTTTCACTCATCACAATTTTCCTCTTTTACACACTCTTCCAAAGACTAAGATTCAAGCTTCCACCCGGTCCACGCCCCTGGCCGGTGGTCGGAAACCTCTACCACATAAAACCGGTCCGGTTCCGGTGTTTTGCTGAATGGACCCAATCTTATGGGCCCATTATATCAGTTTGGTTTGGTTCGACTCTGAATGTAATCGTTTCAAATTCAGAGTTGGCAAAAGAGGTTTTAAAGGAGAAAGATCAGCAGTTGGCTGACCGGCACAGAAGTCGGTCAGCCGCGAAGTTTAGCCGAGATGGGCAGGATTTAATTTGGGCTGACTATGGACCGCATTATGTGAAGGTAAGGAAGGTTTGTACGTTGGAGCTTTTTTCGCCTAAGAGGATTGAAGCTTTGAGGCCTATTAGAGAAGATGAGGTTACTGCTATGGTTGAATCCATTTTCAATGACTCCACCAATTCAGAAAATTTAGGGAAAGGTATATTGATGAGGAAGTACATAGGGGCAGTTGCATTCAACAATATCACAAGGCTGGCATTTGGAAAAAGATTTGTGAACTCAGAAGGTGTAATGGATGAGCAAGGAATGGAATTCAAGGCTATAGTAGCAAATGGGTTAAAGCTAGGAGCATCTCTTGCCATGGCAGAGCACATTCCTTGGTTGAGGTGGATGTTCCCATTAGAAGAGGAGGCTTTTGCTAAGCATGGTGCTCGTCGGGACCGACTTACTCGAGCCATCATGGAAGAACATACTCAGGCACGTCAGAAATCTGGCGGTGCCAAGCAACATTTTGTAGATGCTCTTCTCACTTTGCAAGAAAAATATGACCTTAGTGAAGACACCATCATTGGTCTCCTTTGGGACATGATTACAGCTGGGATGGACACAACTGCAATATCAGTTGAGTGGGCTATGGCTGAGTTGATAAAGAACCCAAGAGTGCAACAGAAGGCACAAGAGGAGCTAGACAAGGTAATTGGTTTTGAAAGGGTGATGTCAGAAACTGACTTCTCAAGCCTCCCTTATCTACAATCTGTAGCCAAAGAAGCTCTAAGGTTGCACCCCCCAACACCATTAATGCTCCCGCATCGCGCTAATGTCAATGTCAAAATTGGTGGCTATGATATTCCCAAAGGGTCCAATGTCCATGTAAATGTGTGGGCTGTCGCCCGTGATCCAGCTGTGTGGAAAGACGCAACTGAGTTTAGACCCGAGAGGTTTCTTGAAGAGGATGTAGACATGAAGGGCCATGATTTTAGGCTACTGCCATTTGGAGCAGGTCGTCGGGTATGCCCGGGTGCACAACTTGGAATTAATATGGTGACATCTATGTTGGGTCATCTATTGCACCATTTCTGTTGGGCAGCACCTGAGGGAGTGAACCCGGAGGAGATTGACATGACAGAGAACCCTGGAATGGTTACATATATGAGGACTCCCTTACAGGTTGTGGCTTCTCCCAGGCTTCCCTCAGAATTGTACAAACGTGTGCCAGCCGATATCTAA 1530 0.4608 MALFLTIPLSLITIFLFYTLFQRLRFKLPPGPRPWPVVGNLYHIKPVRFRCFAEWTQSYGPIISVWFGSTLNVIVSNSELAKEVLKEKDQQLADRHRSRSAAKFSRDGQDLIWADYGPHYVKVRKVCTLELFSPKRIEALRPIREDEVTAMVESIFNDSTNSENLGKGILMRKYIGAVAFNNITRLAFGKRFVNSEGVMDEQGMEFKAIVANGLKLGASLAMAEHIPWLRWMFPLEEEAFAKHGARRDRLTRAIMEEHTQARQKSGGAKQHFVDALLTLQEKYDLSEDTIIGLLWDMITAGMDTTAISVEWAMAELIKNPRVQQKAQEELDKVIGFERVMSETDFSSLPYLQSVAKEALRLHPPTPLMLPHRANVNVKIGGYDIPKGSNVHVNVWAVARDPAVWKDATEFRPERFLEEDVDMKGHDFRLLPFGAGRRVCPGAQLGINMVTSMLGHLLHHFCWAAPEGVNPEEIDMTENPGMVTYMRTPLQVVASPRLPSELYKRVPADI 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03085 509 SUPERFAMILY Cytochrome P450 29 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g03085 509 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g03085 509 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g03085 509 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g03085 509 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g03085 509 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g03085 509 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g03085 509 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g03085 509 PRINTS E-class P450 group I signature 80 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g03085 509 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g03085 509 CDD CYP98 59 491 - -
Trre13g03085 509 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g03085 509 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g03085 509 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g03085 509 Pfam Cytochrome P450 29 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g03085 509 FunFam Cytochrome P450 22 500 - -
Trre13g03085 509 PANTHER CYTOCHROME P450 98A9 9 503 - -
Trre13g03085 509 Gene3D Cytochrome P450 22 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g03085 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03085 Trre-Chr13 36667626 36671948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g03085 1 509 Monolignol Biosynthesis Gene Families AT2G40890 78.978 0.0 867
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03085 K09754 - jre:109008126 935.25