Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03070 ATGATAAATAGCATAATGGATAGTGTCAATGTGATAGATATGAATTTTGATTTGAATGAATGTCCAATAGATGATATGTCTCATGACAGTGGTTACTCACAAACAATTGTTGAGCATTCTGATCATGCTATTGTGGACGTTGATGACATTGGAAGTCTCGAGAAAGAAAACCTGGTACCTTTTAGTGAGAATATTCAGTTAAATGAATTTTTAGAAGAAGTTGATAAAGATGGAACTTGTAGTGAGACAAATATTATCCCTTTTGTTGGTCAAATTTTTCTTAGCGAAGAAGAAGCATATGCCTTTTATAAGAGATATGCATATCATCATGGGTTCTCAATTCGAAAAGGTAGATTCATCAAACAAAATGGGATTGCTAGCCGGCGTGATTTTTTTTGTCACCGTGAAGGTAGCGTGTCCTTAAAAATCATAGACCCGTCAAAAGAACAGAGAAAAAGAGAATCGACAAGGTGTGATTGTAAAGCTCATTTACGAGTTTCATTACAAAAGTCTCATGATATATTTCCAAGTGAGTGGCGAGTTACAAAGTTTGTTCCTGAACATAACCATTGTTTGCTAACTCAATCAGAGACCATACTTTTTGGATGTGCACTCTTACGTAATGAAACAATGGCTACATTTGGGTGGTTGATGAAGAATTTTGTATCTTTGATGAAGAAGCCACCTAAGACTATATTAACTGATCAAGATCCTTGGATGAAAGTGTTGAAAGAAGCAATCTCAAAAGAATTGCCGTCAACAAAACATAGTTTCTGCATATGGCACATCACTTTCAAGTTTAGTTCTTGGTTTAATGCTATACTTCGAGGGAAATATGCACAATGGTGTTCTGATTTTTATGCGTTGTATAGAAATTATTGGGCACTTGCTTATCTTCGTGACTATTTTTTTGGTGGGATGACAACTACCGGAAGATCAGAGAGTATTAATGAATTTATCAAAAGATTCATCAATTCTCACACAAGTTTAACTGATTTTGCAAAACAGGTTGAAATAGCAATTGATGATATCAAGCAAAAAGAAGAGCAATAA 1053 0.3457 MINSIMDSVNVIDMNFDLNECPIDDMSHDSGYSQTIVEHSDHAIVDVDDIGSLEKENLVPFSENIQLNEFLEEVDKDGTCSETNIIPFVGQIFLSEEEAYAFYKRYAYHHGFSIRKGRFIKQNGIASRRDFFCHREGSVSLKIIDPSKEQRKRESTRCDCKAHLRVSLQKSHDIFPSEWRVTKFVPEHNHCLLTQSETILFGCALLRNETMATFGWLMKNFVSLMKKPPKTILTDQDPWMKVLKEAISKELPSTKHSFCIWHITFKFSSWFNAILRGKYAQWCSDFYALYRNYWALAYLRDYFFGGMTTTGRSESINEFIKRFINSHTSLTDFAKQVEIAIDDIKQKEEQ 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03070 350 Coils Coil 330 350 - -
Trre13g03070 350 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 79 349 IPR031052 GO:0006355
Trre13g03070 350 Pfam MULE transposase domain 195 264 IPR018289 -
Trre13g03070 350 Pfam FAR1 DNA-binding domain 102 193 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03070 Trre-Chr13 36252592 36255829 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre13g03070 FAR1 5.2e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03070 - - gmx:102670404 284.648