Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03065 ATGGGAAAAGCCGAAGAAGAACAACACCTGCCACGTGGCGTTACATCATCGGATCAACCGCAAAATGCGGAAACAGAGTGTCGGTGCAGTTATTCTCGGATTCGAAAACTGTTTGGTTTCAGATGCATTCTCGTTTTCCTCTTCTCTCTTGCTCTGTTCCTCTCTGCTTTGTTTTGGTTACCCCCTTTCGTAGATCAGAACAATTTGCACGATGATTCCAAATATAAAGGTTATGATATTGTTGCAAGCTTTATTGTTCATAAGCCGGTCGCTGTGCTAGAAGATAACAAATTGCAGCTCGAGGCTGAAATTCTTGAAGAGATAGAAGCTCCCTCTAAAGTGACCATCTTGTCTTTAGATCCGTTACCTCGGCCAAACACGACAAAAGTGGTATTTGCAGTCGATCCTGATGGTGAAAACTCAGAAACGCCGTTGCCTGCCATTAGTTTGATAAAATCATTGTTTACGTCCTTGGTAATACGCCAATCAGTTCTTCGGCTCACTTCATCCTTCTTGTTCGGAGATCCCTATTTTTTTGAAGTGCTGAAATTTAAAGGAGGAATTACTATAATTCCACAACAGAATGCATTTCCTCTGCAGACAGTGCAAACAAAATTCAACTTTTCTTTGAATTTTCCCATTTATCAAATACAATCAAATTACAACGAGCTGACAAGTCAGCTAAAGTCAGGATTACGTCTGACATCCTATGAGAACTTGCATGTCATCTTATCAAATTCCGAAGGTTCAACAGTAGACGCTCCTACTACTATTCAATCCTCTGTTCTACTTGCGGTTGGGATTCCTTCATCAAAACAGAGGCTAAAGCAATTGGCACAAACCATCATGGGACCTCATAATCTTGGCTTAAATAACACTGAATTTGGCAAGGTTAAGCATGTCAGACTTTCATCCATCTTGCAGCACTCCCTTAATGGCAGTGATACTGCGAGATCACCTTCTCCTGCTCCTGTTCCTCATTCCTCACACCATCACCACCATCACCATCACCACCATCACCACCACCATCATCATCACCATCACAATACTCATCTAACTCCTGCAACTTCTCCTATACCTGCACCTGCACCTGCACCTAAAACTGGGGAGGGTGTGACTCCACCTGAGGTTGGCTCTCCTGCTACTACAAAAGGTGCACCTACACCACACAAAAATTCTCAAGCTCAGCCTCCTGATTGTCCATTCGAGCGTAGAAAAAGGTCTAAGCATAGTGCTGGGAGACATACTTATCTAACACCTGCTGTTGCCCCTAGTATTGAACATCATCATCCTGTTCCTATTTCATCACCAAAACCACAGGTTGAACCCCCTACACATGCTTCTCATTCAGTACCTGCTTTCAGTCCTTTGCCAAATGTAGCTTTTGCTCATGCTGAGCCTCCACCTAAGCGGGAACCAGCTGCAGAACAACCGCCCACACAACCTCATGGGCAATCAATATCTTCATCTTCTGCAGGCTGTCTTAGAACTGTTAAATGGACATCTTTAATATTTCTTGTACTTGTGTTACATGTGTGA 1539 0.4334 MGKAEEEQHLPRGVTSSDQPQNAETECRCSYSRIRKLFGFRCILVFLFSLALFLSALFWLPPFVDQNNLHDDSKYKGYDIVASFIVHKPVAVLEDNKLQLEAEILEEIEAPSKVTILSLDPLPRPNTTKVVFAVDPDGENSETPLPAISLIKSLFTSLVIRQSVLRLTSSFLFGDPYFFEVLKFKGGITIIPQQNAFPLQTVQTKFNFSLNFPIYQIQSNYNELTSQLKSGLRLTSYENLHVILSNSEGSTVDAPTTIQSSVLLAVGIPSSKQRLKQLAQTIMGPHNLGLNNTEFGKVKHVRLSSILQHSLNGSDTARSPSPAPVPHSSHHHHHHHHHHHHHHHHHHHNTHLTPATSPIPAPAPAPKTGEGVTPPEVGSPATTKGAPTPHKNSQAQPPDCPFERRKRSKHSAGRHTYLTPAVAPSIEHHHPVPISSPKPQVEPPTHASHSVPAFSPLPNVAFAHAEPPPKREPAAEQPPTQPHGQSISSSSAGCLRTVKWTSLIFLVLVLHV 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03065 512 MobiDBLite consensus disorder prediction 311 490 - -
Trre13g03065 512 MobiDBLite consensus disorder prediction 1 21 - -
Trre13g03065 512 Coils Coil 90 110 - -
Trre13g03065 512 PANTHER F20B24.21 1 505 - -
Trre13g03065 512 MobiDBLite consensus disorder prediction 327 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03065 Trre-Chr13 36219754 36224262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g03065 1 508 C3H Transcription Factor Family AT3G10810 44.762 2.93e-90 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03065 - - gmx:100792490 608.986