Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03039 ATGTATTTGGTCCAATTAGCATGGCAACTTGACTATAAGGTTTTAAGCATAATAGACAAATTTTACTCAGGTAGTGCTCGAGTTGGTCGCATTGTTATGGCTGCTGTTGCAAAGCATCTTACTCCAGTGATTCTGGAGCTTGGAGGAAAATGTCCAGCAGTTGTTGATTCAGATATCAACTTACAAGTCACTGCTAGAAGAATAATTGCTGGCAAATGGGCTTGTAATAGTGGACAAGCATGCATTTTTGTTGATTATATCATTACAAGGAAAGACTTCGCTCCAACGCTTGTAAGATTGGTTCCATAA 309 0.3883 MYLVQLAWQLDYKVLSIIDKFYSGSARVGRIVMAAVAKHLTPVILELGGKCPAVVDSDINLQVTARRIIAGKWACNSGQACIFVDYIITRKDFAPTLVRLVP 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03039 102 PANTHER ALDEHYDE DEHYDROGENASE 21 99 IPR012394 GO:0006081
Trre13g03039 102 Pfam Aldehyde dehydrogenase family 24 98 IPR015590 GO:0016491
Trre13g03039 102 SUPERFAMILY ALDH-like 22 99 IPR016161 GO:0016491
Trre13g03039 102 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 21 48 IPR016162 GO:0016491
Trre13g03039 102 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 49 99 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03039 Trre-Chr13 31534152 31534540 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g03039 21 98 Aldehyde Dehydrogenase Gene Family AT1G44170 66.667 5.30e-36 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03039 K00128 - gmx:100800699 144.821