Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02931 ATGTTTAAGTATGTAGAGCTATGCGTAGAGATGCGAAAAGGACAGTTAGCGAAGGATGGATTGATCCAGTATCGTTCGATATGTCAGAATGTGAATGTTAGTTCGCTGGAGGAAGTGATTAAGCATTTTATCAACCTATCAACAAAGAATGTTAAACAAGCTTGTAGCGAGGCGCAGACATTAGAACAAGGTCTCGATGTTGATGACTTAGAGGCATATAAAAGGCCAGAGGACTTGATGATGAGTTATGTCGGTGGGGAGAAAGGAAAGGATATATCTGATCAGGAGCTCGTTACCCCATGTTTTAAATTCCTTTGGGAAAGTTACAAGATAGTGCTTGAAATATTGCGGAACAACTCAAAATTCGAAGCCTTATACGCTGAGACTACTCATCGAGCTTTCGAGTTTTGTAAGCAGTATAAAAGAAAAACTGAATTTAGAAGACTCTGTGGAATCATAAGAAACCATTTGGCTAATCTTATCAAATATCGGGACCAACCAGACCGACCTGATCTTTCTTCTCCTGAAAGCTTGCAATTGTATCTTAGATTTGACCAGCTGAAAATTTCCGCTGAACTTGAACTCTGGCAGGAAGCCTTTAGATCTGCTGAAGATATACATGGCCTAATGTGCGTGGTCAGAAAAACACCGAAACCATCCATGATGAGTCTTTACTATGTTAAGTTGACCGAAATATTTTGGATATCTTCAAGTCATTTATATCATGCATATGCATGGTTAAAGCTCTTTTCGTTACAAAAGAGTTTCCACAAAAGTCTGAGTCAGAAAGATATGGAGTTAATAGCTTCAGCTGTTGTTCTATCTGCACTTTTAGTGCCTCCTTATGAAAACAATTCAGAACTAGAGCATGAAATGGAGAGAAATTTGAAGATGGCTAACCTCATATGCTTTAATCTTGAAAATAAGACTGATAGCAAAACAACGCTCTCAAGGTCTTCACTTCTTGCTGAACTGGAATCAGAAGGTGTAATGTCCTATGCTGCACAAGAAGTGAAGGACATTTACTATCTTTTGGAACACAAATTTCTTCCCTCGGATCTTTCACTTGAAGTACTACCCTTGCTAAATAAAATTTCAAAATTAGGGGGTATCACTTCATCGATTCTAAACGTGCAATTGTCAATGTATGTCCCAGCACTTAAAAAGTTAGCTACTCTGAGGTTGCTACAACATGTGTCTAATGTGTACTAG 1212 0.3837 MFKYVELCVEMRKGQLAKDGLIQYRSICQNVNVSSLEEVIKHFINLSTKNVKQACSEAQTLEQGLDVDDLEAYKRPEDLMMSYVGGEKGKDISDQELVTPCFKFLWESYKIVLEILRNNSKFEALYAETTHRAFEFCKQYKRKTEFRRLCGIIRNHLANLIKYRDQPDRPDLSSPESLQLYLRFDQLKISAELELWQEAFRSAEDIHGLMCVVRKTPKPSMMSLYYVKLTEIFWISSSHLYHAYAWLKLFSLQKSFHKSLSQKDMELIASAVVLSALLVPPYENNSELEHEMERNLKMANLICFNLENKTDSKTTLSRSSLLAELESEGVMSYAAQEVKDIYYLLEHKFLPSDLSLEVLPLLNKISKLGGITSSILNVQLSMYVPALKKLATLRLLQHVSNVY 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02931 403 Gene3D UVR domain 168 217 - -
Trre13g02931 403 FunFam Eukaryotic translation initiation factor 3 subunit A 217 291 - -
Trre13g02931 403 Gene3D - 218 295 - -
Trre13g02931 403 Gene3D - 296 403 - -
Trre13g02931 403 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 403 IPR027512 GO:0005852
Trre13g02931 403 FunFam Eukaryotic translation initiation factor 3 subunit A 168 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02931 Trre-Chr13 29217690 29219769 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02931 1 403 Eukaryotic Initiation Factors Gene Family AT4G11420 69.007 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02931 K03254 - gmx:100803796 597.43