Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02930 ATGATGCCTTTCTTTGATTTTTCTGTAGTGGAAAAGATTTCTGTAGATGCTGTTAAGCAAAAATTTCTATCAATGAAAGTTGACCACGGGAAAAAAGTTGTAATTTTCGGAAAGAAGAGTCTTGAGGCTGATGACTTAAGGGATCGCTTGGCCGGTTTTGCTAAACAATTGAATAAGGCAAGACAAATGATATGTCCTCTTGATAGGAAACAATCAAAACTTGAACTATTGCTCCCATGTTTGTTAGAGGTTGTGGCTAAAGATCACAAGATGATCCTTGCTCGAAAATCAATTATTGAGAAGAGGAAAGAAGAACAAGAATAA 324 0.358 MMPFFDFSVVEKISVDAVKQKFLSMKVDHGKKVVIFGKKSLEADDLRDRLAGFAKQLNKARQMICPLDRKQSKLELLLPCLLEVVAKDHKMILARKSIIEKRKEEQE 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02930 107 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 107 IPR027512 GO:0005852
Trre13g02930 107 Pfam PCI domain 8 38 IPR000717 -
Trre13g02930 107 Coils Coil 43 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02930 Trre-Chr13 29216875 29217662 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02930 1 107 Eukaryotic Initiation Factors Gene Family AT4G11420 60.748 3.46e-36 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02930 K03254 - gmx:100803796 156.762