Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02929 ATGAAGATTGAGAACTTAGCTAGGATGATGCCTTTCTTTGATTTTTCTGTAGTGGAAAAGATTTCTGTAGATGCTGTTAAGCAAAAATTTCTATCAATGAAAGTTGACCACGGGAAAAAAGTTGTAATTTTCGGAAAGAAGAGTCTTGAGGCTGATGACTTAAGGGATCGCTTGGCCGGTTTTGCTAAACAATTGAATAAGGCAAGACAAATGATATGTCCTCTTGATAGGAAACAATCAAAACTTGAACTATTGCTCCCATGTTTGTTAGAGGTTGTGGCTAAAGATCACAAGATGATCCTTGCTCGAAAATCAATTATTGAGAAGAGGAAAGAAGAACAAGAATAA 348 0.3592 MKIENLARMMPFFDFSVVEKISVDAVKQKFLSMKVDHGKKVVIFGKKSLEADDLRDRLAGFAKQLNKARQMICPLDRKQSKLELLLPCLLEVVAKDHKMILARKSIIEKRKEEQE 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02929 115 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 115 IPR027512 GO:0005852
Trre13g02929 115 Pfam PCI domain 2 46 IPR000717 -
Trre13g02929 115 Coils Coil 51 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02929 Trre-Chr13 29216875 29217686 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02929 1 115 Eukaryotic Initiation Factors Gene Family AT4G11420 59.130 1.00e-38 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02929 K03254 - gmx:100803796 165.236