Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02906 ATGAATACAACCATTTTATTGATCTCGATATTCTTCTCTGTTCTTCCCTTTGCATTTGGTGATCTAAGGGTTGGATTCTATAGCTCTAGCTGTCCAAGAGCAGAGTTGATTGTACATCAAGTTGTTGAGAGAAGTTTTAACCAAGACAGATCCATAACCGCAGCCTTGCTCCGGATGCACTTCCATGATTGCTTTGTAAGAGGTTGTGATGCATCCATATTAATAGACTCACAAAAGGGAAATCAATCAGAGAAAGATGCAGGAGCAAACAGAACTGTAAGAGGATACAACCTCATAGATGAAGTCAAAAGAATCCTAGAAAATGTATGTCCATTAACAGTTTCATGTGCAGACATAATAGCATTGGCAACAAGAGATTCAGTTGTTTTAGCAGGTGGACCAAGTTACAATGTCCCTACAGGAAGACATGATGGATTGGTTTCATCTATTCATGAAGTTAATCTTCCAGGACCAGAATCCTCTATTAAGGATGTTTTACAAGTTTTTAATTCAAAAGGTATGACAATGGAAGAAATGGTTATCCTTTTAGGAGCACACACTGTTGGATTTACTCATTGTAGTTTCATTAAAAATAGGATTAATAATCAAAGTTTTTTAATGGATAATGATTTAAGAAAAAGGTTGGTTGAGTTTTGTGGTGTTGAAGGTAAAGACCCACTTGTGTTTTTGGATCAAAACACTTCTTTTGTGTTTGATAATCAATTTTATAATCAAATTTTGTTGGGGAGAGGTATGTTGTCTCTTGATCAAAATTTGGCTTTGGATTCAATTTCGAAAGGAGTTGTGACAAGCTTTGCTAGAAATGGAGAGAGTTTTTTAGAGAGATTTGCTGATGCAATGATAAAGTTGGGAAAGATTGATGTTTTAGTTGGAAATCAAGGAGAGATTAGGAAGAATTGCAGAGTTTTTAATTAA 936 0.3515 MNTTILLISIFFSVLPFAFGDLRVGFYSSSCPRAELIVHQVVERSFNQDRSITAALLRMHFHDCFVRGCDASILIDSQKGNQSEKDAGANRTVRGYNLIDEVKRILENVCPLTVSCADIIALATRDSVVLAGGPSYNVPTGRHDGLVSSIHEVNLPGPESSIKDVLQVFNSKGMTMEEMVILLGAHTVGFTHCSFIKNRINNQSFLMDNDLRKRLVEFCGVEGKDPLVFLDQNTSFVFDNQFYNQILLGRGMLSLDQNLALDSISKGVVTSFARNGESFLERFADAMIKLGKIDVLVGNQGEIRKNCRVFN 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02906 311 SUPERFAMILY Heme-dependent peroxidases 21 311 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre13g02906 311 ProSiteProfiles Plant heme peroxidase family profile. 21 311 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre13g02906 311 ProSitePatterns Peroxidases proximal heme-ligand signature. 178 188 IPR019793 -
Trre13g02906 311 CDD secretory_peroxidase 22 310 IPR033905 GO:0004601|GO:0042744
Trre13g02906 311 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601
Trre13g02906 311 FunFam Peroxidase 25 165 - -
Trre13g02906 311 Gene3D Peroxidase, domain 2 156 290 - -
Trre13g02906 311 Pfam Peroxidase 39 275 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre13g02906 311 Gene3D - 26 308 - -
Trre13g02906 311 PANTHER - 5 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre13g02906 311 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre13g02906 311 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre13g02906 311 PRINTS Haem peroxidase superfamily signature 178 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre13g02906 311 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre13g02906 311 PRINTS Haem peroxidase superfamily signature 231 246 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre13g02906 311 FunFam Peroxidase 156 290 - -
Trre13g02906 311 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre13g02906 311 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre13g02906 311 PRINTS Plant peroxidase signature 285 298 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre13g02906 311 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre13g02906 311 PRINTS Plant peroxidase signature 229 244 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre13g02906 311 PRINTS Plant peroxidase signature 245 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre13g02906 311 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre13g02906 311 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre13g02906 311 PRINTS Plant peroxidase signature 177 189 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02906 Trre-Chr13 28797689 28799916 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02906 1 311 Peroxidase AT4G26010 52.564 2.84e-116 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02906 K00430 - gmx:100820340 409.068