Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02742 ATGGAAAAACGACACAATTACGTTAGGAAGACTGCAGAACTTGCTACTCAGTATTACATCAACCCTGCTACTAATCAACCTAATGTTTCTGGACTCATACTTGCTGGTTCGGCCGATTTCAAGACTGAGTTGAGCCAGTCAAATATGTTCGATCCTCGTTTGCAAGTAAAAATATTGAAAGTGGTTGATGTTTCCTATGGCGGGGAAAATGGCTTTAACCAAGCTATTGGATTATCTGCAGAGATTTTATCTAATGTGAAGTTCGTACAAGAGAAACACTTATTAGAAAAATATTTCAAAGAGATAAAACAAGAAACCGGGAAATATGTTTACGGAGTTAATGACACATTGAAGGCCCTAGAGATGGGTGCTGTTGAGACACTCATTGTATGGGAGAATTTGGATATTAATAGGTATGTGCTGAAAAATGCTACCACCAGTGAGATAGCAATAAAGCATTTGAAGAAGGAACAAGAAGCAAATCAAAGCAACTTTCGCGATGCGGCTACCTCTGTAGAGTTGGAGGTTCAAGAAAAGATGCCATTACTTGAGTGGTTTGCAAATGAGTATAAGAAAATTGGATGCTTGCTGGAATTTGTGACCAACAAATCTCAAGAAAGGGTCAATATTTTGTAG 636 0.3821 MEKRHNYVRKTAELATQYYINPATNQPNVSGLILAGSADFKTELSQSNMFDPRLQVKILKVVDVSYGGENGFNQAIGLSAEILSNVKFVQEKHLLEKYFKEIKQETGKYVYGVNDTLKALEMGAVETLIVWENLDINRYVLKNATTSEIAIKHLKKEQEANQSNFRDAATSVELEVQEKMPLLEWFANEYKKIGCLLEFVTNKSQERVNIL 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02742 211 Pfam eRF1 domain 2 2 84 IPR005141 -
Trre13g02742 211 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 1 207 IPR004403 GO:0003747|GO:0006415
Trre13g02742 211 Gene3D eRF1 domain 2 1 85 IPR042226 -
Trre13g02742 211 SUPERFAMILY Translational machinery components 2 83 - -
Trre13g02742 211 FunFam Peptide chain release factor subunit 1 86 210 - -
Trre13g02742 211 Gene3D - 86 210 IPR029064 -
Trre13g02742 211 SUPERFAMILY L30e-like 85 206 IPR029064 -
Trre13g02742 211 Pfam eRF1 domain 3 88 206 IPR005142 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02742 Trre-Chr13 26291139 26291774 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02742 1 206 Eukaryotic Initiation Factors Gene Family AT3G26618 85.437 2.95e-127 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02742 K03265 - gmx:100786788 362.844