Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02741 ATGACTGATGGTGAATCAGACAAGAACATTGAGATATGGAAGATGAAAAACTTGATTAAAGAACTTGAAGCTGCAAGAGGTAATGGTACTAGCATGATTTCTCTGATAATACCTCCGCGCGATCAAATATCTCGTGTCAATAAGATGTTGGGAGATGAATTTGGAACTGCTTCAAATATCAAAAGTAGGGTAAACCGACAATCTGTGCTCGGAGCCATTACTTCTGCTCAACAGAAGTTGAAATTATATAACAAGGTTCCTCCAAATGGATTAGTCCTTTATATTGGTACTGTTGTCACTGATGAAGGCAAGGAAAAGAAAAAGACGTGTGAGTTTGAACCGTTCAAACCGATCAATGCATCGTTTTATCTCTGCAATAACAAATTTCATACAGAAGCTCTAAGTGAACTTCTAGAATCGGATGACAAATTTGGTTTTATTGTTATGTATGGAAATGGAAACCTTTTCGGAACTTTAAGTGGAAATACTCGTGAAATGCTTCATTAA 507 0.3649 MTDGESDKNIEIWKMKNLIKELEAARGNGTSMISLIIPPRDQISRVNKMLGDEFGTASNIKSRVNRQSVLGAITSAQQKLKLYNKVPPNGLVLYIGTVVTDEGKEKKKTCEFEPFKPINASFYLCNNKFHTEALSELLESDDKFGFIVMYGNGNLFGTLSGNTREMLH 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02741 168 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 4 168 IPR004403 GO:0003747|GO:0006415
Trre13g02741 168 FunFam Eukaryotic peptide chain release factor subunit 1 1 134 - -
Trre13g02741 168 Gene3D eRF1 domain 2 141 168 IPR042226 -
Trre13g02741 168 SMART eRF1_1_2 3 139 IPR005140 -
Trre13g02741 168 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 6 139 IPR024049 -
Trre13g02741 168 Pfam eRF1 domain 1 19 137 IPR005140 -
Trre13g02741 168 Gene3D eRF1 domain 1 1 138 IPR024049 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02741 Trre-Chr13 26290563 26291069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02741 1 168 Eukaryotic Initiation Factors Gene Family AT3G26618 83.929 1.49e-101 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02741 K03265 - rvl:131328824 300.827