Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02724 ATGGAAACCGCTAGCCAAGAAACTCCACTTCTTCAAGACATGAAGGTGACAATCCACAAAACATCAATGGTTACTCCATCAAAACTAACTGAGAAAAAATCCTTGTTCTTATCAAACATAGACAAGGTTCTTAATTTCGACGTGAAAACGGTTCATTTCTTCGAAGCAAGCCAAGATTTTCCTCCTCAAATAGTGACTTTGAAGTTAAAAGAAGCTCTAGAAGATGTTCCAGTGGATTATGAATTTCTTGCTGGAAGAATAAAGATGAACTCTAAAACCAATAGGTTGGAGATAGATTGCAATACAGAAGGTGTTGGCTTTGTTGTGGCATCTAGTGAGTATAAATTGGATCAACTTGGGAACTTAGCTTATCCTAATCAAGCTTTTGCACAATTTGTTCACAAGACTAAAGATTTCCTTAAGATAGGTGATATACCACTATGTGTTGTCCAGCTAACATCCTTCAAGTGTGGTGGTTTCTCAATTGGCATCACAACCAGCCATGCAACCTTTGATGGGCTTAGCTTCAAAACATTCTTAGACAACCTTGCTTCATTGGCTGCTAACAAGCCACTGGCCGTGATACCCTGCCATGATAGGCAACTCTTAGCCGCCCGCTCCCCGCCACGTGTCAATTTTCCCCACCCTGAAATGATCAAGCTTGATGATCTACCTTCAGGAATTGGACATGGTATCTTTGAAGCCTCATTAGATGAACTTGACTTCAAGGTTTTTCAATTAACCTCTGAAAATATCAACAATCTTAAGGAAAAGGCAAAGGTAATTAATAACACTGCACATGTCACCGGTTTTAATGTCATCACCGCACATGTATGGAGATGTAAGGCGTTATCTGGACCGTATGATCCTAATAGGTCATCGACTATATTATATGCTGTTGATATACGCTCAAAGTTAAATCCTCCACTATTAAAATCATACACTGGAAATGCGGTTTTAACCGCGTACGCTTCAATGAAGTGTGAGGAATTGATGGAAGGAGAGTTCTCGAGGTTGGTGGAGATGGTGGCGGAGGGATCAAGAAGAATGAGTGATGAGTATGCAAGGTCTATTATTGATTGGGGAGAGATGTATAATGGTTTTCCAAATGGGGAGGTTTTGGTGTCTTCATGGGGGAGGTTAGGGTTTGAAGATGTGATGTATCCATGGGGGAAGCCTAAATATTGTTGTCCGGTGATGTATCAAAGAAAGAATATTATACTATTATTTCCTCCTTTTCATGGATCAGGTGAAGGTGGTGATGTTGAGGTAAATATTATAGTGGCTCTTCCTCCTAAGGAAATGGAAAAATTTCAAAGTCTCTTTTACACGTTTTGA 1338 0.3991 METASQETPLLQDMKVTIHKTSMVTPSKLTEKKSLFLSNIDKVLNFDVKTVHFFEASQDFPPQIVTLKLKEALEDVPVDYEFLAGRIKMNSKTNRLEIDCNTEGVGFVVASSEYKLDQLGNLAYPNQAFAQFVHKTKDFLKIGDIPLCVVQLTSFKCGGFSIGITTSHATFDGLSFKTFLDNLASLAANKPLAVIPCHDRQLLAARSPPRVNFPHPEMIKLDDLPSGIGHGIFEASLDELDFKVFQLTSENINNLKEKAKVINNTAHVTGFNVITAHVWRCKALSGPYDPNRSSTILYAVDIRSKLNPPLLKSYTGNAVLTAYASMKCEELMEGEFSRLVEMVAEGSRRMSDEYARSIIDWGEMYNGFPNGEVLVSSWGRLGFEDVMYPWGKPKYCCPVMYQRKNIILLFPPFHGSGEGGDVEVNIIVALPPKEMEKFQSLFYTF 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02724 445 Pfam Transferase family 14 443 - -
Trre13g02724 445 Gene3D - 12 219 IPR023213 -
Trre13g02724 445 Gene3D - 237 445 IPR023213 -
Trre13g02724 445 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 22 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02724 Trre-Chr13 26155219 26158143 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02724 14 443 Monolignol Biosynthesis Gene Families AT5G48930 31.729 1.81e-55 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02724 K13065 - gmx:100780971 656.751