Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02682 ATGGAGTTCCTAATTAAACTCATCACATTTCTACTCTTCTTAATACCTACAATCACTTCCTCACAATATTTAGGAAACAACCTATTCACTAATCGAAAGATTTTCTTAAAACAAGAAACAATTACCTCGTACGCTGTCGTATTTGATGCTGGTAGCACCGGTAGCCGTGTTCATGTCTACCATTTTGACCAGAACTTAGATCTTCTTCATATTGGCAAAGATGTTGAGTTTTATAGTAAGATAAAACCTGGTTTGAGTGCATATGCGGATAATCCAGAACAAGCTGCAAAATCTTTGATTCCACTTTTAGAGCAAGCAAAAAATGTGGTCCCGGAGGATTTTCATTCTAAGACACCCATTAGACTTGGGGCAACTGCAGGTTTAAGGCTTTTGGATGGAGATGCTTCTGAAAAGATATTACAAGCGGTAAGGGATATGCTGAGCAACAGAAGTACCTTCAACGTTCAACCTGATGCAGTTTCTATTATTGATGGAATCCATGAAGGTTCTTATCTATGGGTGACAATAAACTATGTATTGGGGAATTTGGGGAAAAGATTCACAAATACAGTGGGAGTAATTGACCTTGGAGGTGGATCAGTTCAAATGGCATATGCTGTGTCAAAAAAAACAGCAAGAAATGCTCCAAAAGTTGCTGATGGAGATGATCCATACATTAAGAAGATTGTACTCAAGGCAAAACCATATGATCTCTATGTTCACAGTTACTTACACTTTGGTAGAGAAGCATCTCGGGCTGAGATTTTGAAGGTCACTCATGGTTCTGCCAACCCTTGCATTTTAACTGGATTTGATGGAATCTATACATATTCAGGTGAAGAGTTTAAGGCCAGTGCCCCTACTTCTGGAGCCAACTTTGATAAATGCAAAAAGATAATTCAAAAGGCTCTTAAATTGGATTATCCATGTCCTTATCAAAATTGCACTTTTGGTGGAATTTGGAATGGTGGAGGAGGAAGTGGACAGAAGAAACTTTTTGCTGCTTCATCTTTCTTTTTCTTACCTCAAGAAGTTGGTATGGTTGATCCAAATAAATCTAATTTAAAACTTCGTCCAGTGGATCTTGAGAATAAAGCTAAGATAGTTTGTACATTAAATGTTGATGATGCAAAATCAGCTTATCCACTTCTTGAGCAGTTCAATACAGCTCCATATGCATGCATGGATCTTATATATCAGTATGAGTTGCTTGTTAATGGATTTGGCTTAGATCCATTGCAAGAGATAACAACAGGGACGAAAATTGAATATCAAGAGGCTTTTGTGGATGCTGCATGGCCTCTAGGCAATGCCGTAGAAGCAATATCATTGTTACCTAAATTTGAACGATTGATGTATTTTGTTTAA 1368 0.3757 MEFLIKLITFLLFLIPTITSSQYLGNNLFTNRKIFLKQETITSYAVVFDAGSTGSRVHVYHFDQNLDLLHIGKDVEFYSKIKPGLSAYADNPEQAAKSLIPLLEQAKNVVPEDFHSKTPIRLGATAGLRLLDGDASEKILQAVRDMLSNRSTFNVQPDAVSIIDGIHEGSYLWVTINYVLGNLGKRFTNTVGVIDLGGGSVQMAYAVSKKTARNAPKVADGDDPYIKKIVLKAKPYDLYVHSYLHFGREASRAEILKVTHGSANPCILTGFDGIYTYSGEEFKASAPTSGANFDKCKKIIQKALKLDYPCPYQNCTFGGIWNGGGGSGQKKLFAASSFFFLPQEVGMVDPNKSNLKLRPVDLENKAKIVCTLNVDDAKSAYPLLEQFNTAPYACMDLIYQYELLVNGFGLDPLQEITTGTKIEYQEAFVDAAWPLGNAVEAISLLPKFERLMYFV 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02682 455 Gene3D - 44 438 - -
Trre13g02682 455 FunFam Apyrase 1 164 423 - -
Trre13g02682 455 Gene3D Exopolyphosphatase. Domain 2 164 423 - -
Trre13g02682 455 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 11 443 IPR000407 GO:0016787
Trre13g02682 455 CDD NBD_sugar-kinase_HSP70_actin 46 205 - -
Trre13g02682 455 Pfam GDA1/CD39 (nucleoside phosphatase) family 39 445 IPR000407 GO:0016787
Trre13g02682 455 FunFam Ectonucleoside triphosphate diphosphohydrolase 5 44 173 - -
Trre13g02682 455 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 163 178 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02682 Trre-Chr13 25354563 25365751 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02682 43 443 Calmodulin-binding Proteins AT3G04080 54.229 1.64e-151 437