Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02678 ATGCAGGCAACGGCAGGTTTAAGGCTTTTGGATGGGAATTCTTCCGAATTGATATTGGAAGCGGTTTCAAAATTGCTCAGCAACAGAAACACTTTTAACGTTCAATCTGATGCAGTAGGAATTATTGATGGAACTAAAGAAGGTTCTTATTTATGGGTGACAATTAACTATGTTTTGGGAAAGTTGGGAAATAAATTTTCAGAGACAGTGGCAGTAGCTGATCTTGGAGGTGGATCAGTTCAAATGGTATATGCAATCTCAAGAGACCAAGCAAGAAAAGCTCCAAAAGTACCTCAGGGAGAGGATCCATACATAAAAAAGATTGTACTTAAAGGAAATAAATATTACCTCTATGTTCACAGCTACTTGCGCTTTGGCAAAGAAGCATCTCGTGCACAAATTTTGAAAGTCACTAATGGTTCTTCTAATCCTTGCATTTTAGCCGGCTATGATGGAACTTATACATATTCAGGAGAGGAGTATAAGGCCTATGCCCCAGCTTCTGGCTCCAGCTTGGACGAATGCAGAGAGGTCATTCGTAAGGCTCTTGAAGTGAATCATTCATGTCCCTATTCAAGTTGCACTTTTGATGGAATATGGAGTGGTGGAGGAGGAAAAGGACAGAAAACTCTATACGCTACTTCATCATTTTATTATGTGCCTCAAAATATTGGTCTTTTTGATCCAAATAAGCCCAATTCTAAAATTTATATTGAGGAATTGAGGGCCGCAGCTGAGCAAGTTTGTAAAATAAAATTTAAGGATGCCAAAGCCAAATTTCCACTTCTTGCTGAGTCCAGTCTTCCATATGCATGCTTGGATCTTACTTACCAATATACTTTGTTCGTTGATGGATTTGGCCTAGATCCATTACAACGGATTACCGTGGCAAATGAAATTGAATACCAAGGTGCTGTTGTGGATGCAGCATGGCCTCTTGGCAATGCAATAGAAGCTATATCATCATTGCCTAAATTTGATCGTTTCATGTATTTTATTTAA 1002 0.3882 MQATAGLRLLDGNSSELILEAVSKLLSNRNTFNVQSDAVGIIDGTKEGSYLWVTINYVLGKLGNKFSETVAVADLGGGSVQMVYAISRDQARKAPKVPQGEDPYIKKIVLKGNKYYLYVHSYLRFGKEASRAQILKVTNGSSNPCILAGYDGTYTYSGEEYKAYAPASGSSLDECREVIRKALEVNHSCPYSSCTFDGIWSGGGGKGQKTLYATSSFYYVPQNIGLFDPNKPNSKIYIEELRAAAEQVCKIKFKDAKAKFPLLAESSLPYACLDLTYQYTLFVDGFGLDPLQRITVANEIEYQGAVVDAAWPLGNAIEAISSLPKFDRFMYFI 333
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02678 333 Pfam GDA1/CD39 (nucleoside phosphatase) family 1 323 IPR000407 GO:0016787
Trre13g02678 333 Gene3D Exopolyphosphatase. Domain 2 43 301 - -
Trre13g02678 333 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 42 57 IPR000407 GO:0016787
Trre13g02678 333 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 2 322 IPR000407 GO:0016787
Trre13g02678 333 FunFam Apyrase 1 43 301 - -
Trre13g02678 333 Gene3D - 2 317 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trre13g02678 Trre-Chr13 25322458 25330178 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02678 3 322 Calmodulin-binding Proteins AT3G04080 53.271 1.01e-112 333