Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02677 ATGGGTTTGCACTGGCCAAAGACTAAGAGCATGGAGTTTCTAATAAATCTCATCACTATTCTACTCTTCTTAACCCCTGCAATCTCTTCCACCCAATATCTTGGAAACAATCGTAAGATATTCCCAAAACAAGAAACAGTTACCTCGTACGCTGTCATCTTTGATGCTGGTAGCACTGGTAGCCGTGTTCATGTCTACCATTTTGATCAGTACTTGGATCTCCTTCACATTGGCAATGATGTTGAGTTTTATAATAAGACAACACCCGGTTTGAGTGCATATGCAGATAATCCGAAGCAAGCAGCCGAATCTCTGATTCCACTTTTAGAGCAAGCAGAAAACGTGGTTCCTGTGAATCAGCAGCCCAAAACACCTGTTAGCCTTGGGGCAACGGCAGGTTTAAGGCTTTTGGATGGGAATTCTTCCGAATTGATATTGGAAGCGGTTTCAAAATTGCTCAGCAACAGAAACACTTTTAACGTTCAATCTGATGCAGTAGGAATTATTGATGGAACTAAAGAAGGTTCTTATTTATGGGTGACAATTAACTATGTTTTGGGAAAGTTGGGAAATAAATTTTCAGAGACAGTGGCAGTAGCTGATCTTGGAGGTGGATCAGTTCAAATGGTATATGCAATCTCAAGAGACCAAGCAAGAAAAGCTCCAAAAGTACCTCAGGGAGAGGATCCATACATAAAAAAGATTGTACTTAAAGGAAATAAATATTACCTCTATGTTCACAGCTACTTGCGCTTTGGCAAAGAAGCATCTCGTGCACAAATTTTGAAAGTCACTAATGGTTCTTCTAATCCTTGCATTTTAGCCGGCTATGATGGAACTTATACATATTCAGGAGAGGAGTATAAGGCCTATGCCCCAGCTTCTGGCTCCAGCTTGGACGAATGCAGAGAGGTCATTCGTAAGGCTCTTGAAGTGAATCATTCATGTCCCTATTCAAGTTGCACTTTTGATGGAATATGGAGTGGTGGAGGAGGAAAAGGACAGAAAACTCTATACGCTACTTCATCATTTTATTATGTGCCTCAAAATATTGGTCTTTTTGATCCAAATAAGCCCAATTCTAAAATTTATATTGAGGAATTGAGGGCCGCAGCTGAGCAAGTTTGTAAAATAAAATTTAAGGATGCCAAAGCCAAATTTCCACTTCTTGCTGAGTCCAGTCTTCCATATGCATGCTTGGATCTTACTTACCAATATACTTTGTTCGTTGATGGATTTGGCCTAGATCCATTACAACGGATTACCGTGGCAAATGAAATTGAATACCAAGGTGCTGTTGTGGATGCAGCATGGCCTCTTGGCAATGCAATAGAAGCTATATCATCATTGCCTAAATTTGATCGTTTCATGTATTTTATTTAA 1383 0.3984 MGLHWPKTKSMEFLINLITILLFLTPAISSTQYLGNNRKIFPKQETVTSYAVIFDAGSTGSRVHVYHFDQYLDLLHIGNDVEFYNKTTPGLSAYADNPKQAAESLIPLLEQAENVVPVNQQPKTPVSLGATAGLRLLDGNSSELILEAVSKLLSNRNTFNVQSDAVGIIDGTKEGSYLWVTINYVLGKLGNKFSETVAVADLGGGSVQMVYAISRDQARKAPKVPQGEDPYIKKIVLKGNKYYLYVHSYLRFGKEASRAQILKVTNGSSNPCILAGYDGTYTYSGEEYKAYAPASGSSLDECREVIRKALEVNHSCPYSSCTFDGIWSGGGGKGQKTLYATSSFYYVPQNIGLFDPNKPNSKIYIEELRAAAEQVCKIKFKDAKAKFPLLAESSLPYACLDLTYQYTLFVDGFGLDPLQRITVANEIEYQGAVVDAAWPLGNAIEAISSLPKFDRFMYFI 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02677 460 Gene3D Exopolyphosphatase. Domain 2 170 428 - -
Trre13g02677 460 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 17 449 IPR000407 GO:0016787
Trre13g02677 460 FunFam Apyrase 1 170 428 - -
Trre13g02677 460 Pfam GDA1/CD39 (nucleoside phosphatase) family 46 450 IPR000407 GO:0016787
Trre13g02677 460 Gene3D - 50 444 - -
Trre13g02677 460 CDD NBD_sugar-kinase_HSP70_actin 52 211 - -
Trre13g02677 460 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 169 184 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02677 Trre-Chr13 25322458 25341435 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02677 27 449 Calmodulin-binding Proteins AT3G04080 52.123 2.49e-149 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02677 K14641 - gmx:100781628 637.491