Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02619 ATGCAAAATTCTTTAGAAGAAACACTACCTGGATTTGTTCTTCAATTAGCTCTTATCTTATTATTCAATCGTATTTTGCTATTTCTCTCTGAATTTTGCAAAGTACCTCGTATTGTTCCCAACATTTTTGCTGGTTTTTTATTAGGTCCATCTGGTTTGGGAAAATGGAAATATTTCTTCAAAAGTGTATTCCCATACAACAGTTTGATGACATTAGAGACAGTGGGAGCATTGACACTTGTTTACTATGTGTTTTTGATTGGTTTAGAAATGGATTTAAAAGCAATTAGAAGATGTTACTTCAATAAGAAGGCAATGATTCTTGCATCTACTTGTATAGTCTTCACATTACCAATTGGTATGTGTTTATACTACCTTTTTGTAACAGACATGGGTCACAAAAGATTGTCATCTATAGAAACTGATAAACACATGAGAGGTGCATTATTTTGGGGATTGACACTTTCATGTAGTAGTGATTTTCCTGAAATTGTTAAAATTCTTTCAGATTTGAAGCTTTTGTTAACAGATAATGGACAATTGGCGATAACTTCTATTTTGATTAATGACTTGTTGTGTTGGACATTATTTATGATGGCTCTAACACAACTCATTTATGTTTCTTTCGAGTCACTACTCATCGTCGTGTTACTTTTGTTGGTATGTTTCTATGCGGTTTATCCTTTTATTAAGTGGGTTGTTAAGAAAATTTCAAAAGGTGATCGCGAGTTTAGGGAGTCGCAAGTGCTAATTCTTCTTAACGTGGTTTTGGTCATTGGATTAATCGCTGATGGGTTAGGTTCACATTCAATAACCGGTGCTTTCTTTTTAGGAGTTTTTATCCCAAAGGGTATGCTTAACAATGCGGTTCAAGATAAGGTTTATGATTTTATGGCCGCATTCATGATGCCTCTATTTTTTCTCATGATTGGGGCGAGAACTAATATTCGAGATTTGGCTTTGAACACACATTGGATAACGGTTGTCACTGTTATTGTGTTAGCTTTATTGGTAAAAATGGTGTTCGTTTTTGTGGTTTCTAAGATATATCGGATGCCACTCATGGATAGATTATCCCTTGCACTTCTCATGAATACTAAAGGGATAACGCCGCTAATCATTTTGTACTCCGCCATGGATAGAATAGACCTAGTGAGCCAAACCTATGTGGTGATGTTGTTGGCATGTTGGTTAATGACAGCTATTGCTGGTCCTGTCTTATATTTCATCACACAATCCGCCACAAGCAAAGGTATTGGAAGTAAAAGGAGGAATCTGCAAGACACACGACCAGACTCGCCACTTAGAGTGCTGGCTTGTGTCCACTCAAAACACGACGCCAATGCCATCATCAGCCTTCTCAAAGCATCCAGTCCATCAGTTAGGTCTCCAATTCAGGTGTTGGCCGTGGAGTTGATCGAGATGTCAGATAGACCAACTTCATCACTGGTCATAAGAGACGCTCGGAAGCCTTCATTTAAAGCCCATCCAGTCCGGGTAGAAAGCTTTCGGAAAAACAACGGAGACAAACTTGGAAGCTTCGACAACCTAAGCCAAGCTATATTTGCTGACAAACTCAGAATTATCTCCGACTACAACACCATGCACAAAGACATCATAAACCTCTGCCTACGTAGAAACGTAAACCTCATTGTAACCACTCTCCACAGACAACCTACCTATGACGGATTAGGCGCAGGCACCGCGACTGCTAGAGCCATCAACATAATCAACAGAGACCATGATAGCAAGGATGAGAAGAGACTAGTATTGGAAAATCTAGAAAAAGGAACACCGTGCAGTTTAGCAATTTTCGTTGACCGTGATTTCGGTGGTGAGAAGAATTCTAAAGAGATGAGAATAGCTATGTTATACATTGGCGGTGTTGATGACCGTGAAGCACTTTCTTATGCTTGGAGAATGAGTAGGAACACGGAGATTCATTTAACGGTGGTGAGGCTTGTTTGGGACAGTCCTGATGATGAGTTCAATGAATTGGACAGAGAGTATTTAAGAGTATTTGTGTATCAAACAAATGATACACCGTCGATAAGGTATTTGGAAAAAGTGGTGAAAGATGAGAAGGAAACCGTAAGGCTTTTAAATAGGATCGGGAGTAAAGGATTCGATTTGTATATCATCGGGAGAGGACATGGGAGAAAGATGCCATTGGCGCAAACGTTGAATCCTGTTTTGGATGAGCCTGTTTTTGGTCCTCTTGGTGATACTTTGACAGATTTGAATTCTGCTGCTAACACATCTATTTTGATATTTCAAAAAGAAGCTGAAAGTGATAATTCCGCGAAACATGAGTGCGATACTTCTACGATATCTTCGCAGTTTTATGATGGTGTTATGGATCAACAAGAGCAACAGGTGTATACTCCAGCAGTGTCATTTGGTCCCAATTTACGGTGA 2418 0.3912 MQNSLEETLPGFVLQLALILLFNRILLFLSEFCKVPRIVPNIFAGFLLGPSGLGKWKYFFKSVFPYNSLMTLETVGALTLVYYVFLIGLEMDLKAIRRCYFNKKAMILASTCIVFTLPIGMCLYYLFVTDMGHKRLSSIETDKHMRGALFWGLTLSCSSDFPEIVKILSDLKLLLTDNGQLAITSILINDLLCWTLFMMALTQLIYVSFESLLIVVLLLLVCFYAVYPFIKWVVKKISKGDREFRESQVLILLNVVLVIGLIADGLGSHSITGAFFLGVFIPKGMLNNAVQDKVYDFMAAFMMPLFFLMIGARTNIRDLALNTHWITVVTVIVLALLVKMVFVFVVSKIYRMPLMDRLSLALLMNTKGITPLIILYSAMDRIDLVSQTYVVMLLACWLMTAIAGPVLYFITQSATSKGIGSKRRNLQDTRPDSPLRVLACVHSKHDANAIISLLKASSPSVRSPIQVLAVELIEMSDRPTSSLVIRDARKPSFKAHPVRVESFRKNNGDKLGSFDNLSQAIFADKLRIISDYNTMHKDIINLCLRRNVNLIVTTLHRQPTYDGLGAGTATARAINIINRDHDSKDEKRLVLENLEKGTPCSLAIFVDRDFGGEKNSKEMRIAMLYIGGVDDREALSYAWRMSRNTEIHLTVVRLVWDSPDDEFNELDREYLRVFVYQTNDTPSIRYLEKVVKDEKETVRLLNRIGSKGFDLYIIGRGHGRKMPLAQTLNPVLDEPVFGPLGDTLTDLNSAANTSILIFQKEAESDNSAKHECDTSTISSQFYDGVMDQQEQQVYTPAVSFGPNLR 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02619 805 Coils Coil 803 805 - -
Trre13g02619 805 PANTHER CATION/H + ANTIPORTER 3 761 - -
Trre13g02619 805 Gene3D - 11 417 IPR038770 -
Trre13g02619 805 Pfam Sodium/hydrogen exchanger family 18 407 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02619 Trre-Chr13 24464456 24468327 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02619 34 760 Antiporter Super Family AT2G13620 32.546 5.90e-135 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02619 K26731 - psat:127126630 1113.98