Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02617 ATGGTGAGTGTCCTATCTCATTCAACTATCATTCCCTCTAAACAAACCCCTAATCCAAAACTCTACTCATTATGTGAACAAATCAAGCTTCGACTCATGGTTTTAAATTGCGCTGGAAGATTGAGTTGGATCAATGGAGGAAGAAGATGGGAAATTCATTGTAAATCTAAAGGAGCACTTTTTTTAGAAGCTAAATGTGAAGAATTAACCAATTTGAATCAATTGGGTGATTTTGTACCAACTAATTTGGTGTCACAACTCATACCAAATATTAATTACAATCTTCCTCTTGAAGACATTCCCTTATTGGCTGTGCAACTAACAAGGTTTCCATGTGGAGGTTTTACGCTAGGCGTTGCTTTATGTCGAGCCGCAACCGATGGAACTGCAACCATGCGGTTTATGAATGTGTGGGCTAAGCTTGCGCGTGGGGAGAATTTGGACCCAAATGAGTTTCCGTGTCATGATCGAACCACGTTAAATTCGCACAAATTAACACATTTGCCGTCCTTGAATTGCCAGCACCGTGAGTTTAACGCGCCTCCTATTTGGGTGGGTAGTGATTTGAATGGCAATAGAGAAGTCAGTGTTGCTATTGTTAAACTCACCCGAGAACAAGTTTTAAAGCTTAAGAAAAAAGCTAGTTCTCGCGTGAGTTTTCAACCCACCTCCAAAGATGTCCATAGGACAAAACCTTATTCAACTTTTGAGGTTATTGCAGGACATCTTTGGAAGTGTGTTACCAAAGCACGCCACATAGGAAACGATGATCAACCAACGAGGTTGTCCACATTGGTTAATTGTCGAAATCGTTTACACCCACCGCTTCCTAATGGTTATGTTGGGAATGCAGCATTTCCAACCGTGACGCCAACTCGTTCCTTTAATGATCTTATTTGCAAACCTTTGGGTGATGCAGTGGAGGATGTTAAGAAAGCAATTGAAAGGGTGAACGGGGAATATGTAACGTCCGCACTTAATTACATAGATCGCGAGAAGGACATGGATTTATTGAGGTATAATTTTCACTATCCTGCAAAGAGTGTAATTAATGAGGGACAATATATGGGGAATCCTAATCTTTTTGTTGTAAGTTGGATGAATTTTTCGTATAAGGATGCAAATTTTGGATTGGGTGAACCTGTTTATTTTGGACCAGGGTACATCGATTCTGAAGGAAAGGTATTCATTATGAATAATAATAATGGTGATGGTATTGTGGTGGCTATTTCTTTAGAAGCATCTTTTATGGATAGTTTTAAGAAAATTTTTTATGATGACATTAGAGAGGTGCTTTGTAATTCTAAATTGTAG 1314 0.3904 MVSVLSHSTIIPSKQTPNPKLYSLCEQIKLRLMVLNCAGRLSWINGGRRWEIHCKSKGALFLEAKCEELTNLNQLGDFVPTNLVSQLIPNINYNLPLEDIPLLAVQLTRFPCGGFTLGVALCRAATDGTATMRFMNVWAKLARGENLDPNEFPCHDRTTLNSHKLTHLPSLNCQHREFNAPPIWVGSDLNGNREVSVAIVKLTREQVLKLKKKASSRVSFQPTSKDVHRTKPYSTFEVIAGHLWKCVTKARHIGNDDQPTRLSTLVNCRNRLHPPLPNGYVGNAAFPTVTPTRSFNDLICKPLGDAVEDVKKAIERVNGEYVTSALNYIDREKDMDLLRYNFHYPAKSVINEGQYMGNPNLFVVSWMNFSYKDANFGLGEPVYFGPGYIDSEGKVFIMNNNNGDGIVVAISLEASFMDSFKKIFYDDIREVLCNSKL 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02617 437 Gene3D - 33 180 IPR023213 -
Trre13g02617 437 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 37 424 - -
Trre13g02617 437 Gene3D - 187 427 IPR023213 -
Trre13g02617 437 Pfam Transferase family 38 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02617 Trre-Chr13 24370835 24374262 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02617 38 426 Monolignol Biosynthesis Gene Families AT5G48930 35.115 3.76e-68 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02617 K13065 - gmx:100775549 527.709