Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02616 ATGAAAACATGGTACGAGGTTGTGGAAATAAGGAACAGGTTGAATCCACCTATTCCTAAGAATTATTTTGGGAATGCAACATTTCCAACAGTGACACAAATTTGTTCATTTGATGATGTTGTGAATAAGCCCTTTTGTTATGTGGTTGGGAAAGTGAGGGAAGCTATTGAGAAAATGAATGATGAATATGTAAGATCTGTTCTTGATTATATAGCAAATCAGAAAGATATGAATTTGTTAAGGGACAAGTTTCATAATTTTGCTAAAAGAAATGGACAATTCGGCGGCGACCCAAATTTATATGTTGTTGGTTGGACTAATTTTCCATTTTATGAGACTGATTTTGGGTGGGGGAAACCTGATTATTTGGTTCCTGGGATTACTAGTTCTGATGGTATTGGTAAGGCTTATATTGTTGATGAAGCTAATGGTGATGGTTTTCTTGTAACTGTTTGTTTGCAAACTTTTCATATAGATGCTTTGAAGAAGTTGTTTTATGAGGATATGGAAATTATCACTAGTTCCAAACTATGA 534 0.3427 MKTWYEVVEIRNRLNPPIPKNYFGNATFPTVTQICSFDDVVNKPFCYVVGKVREAIEKMNDEYVRSVLDYIANQKDMNLLRDKFHNFAKRNGQFGGDPNLYVVGWTNFPFYETDFGWGKPDYLVPGITSSDGIGKAYIVDEANGDGFLVTVCLQTFHIDALKKLFYEDMEIITSSKL 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02616 177 Gene3D - 3 168 IPR023213 -
Trre13g02616 177 Pfam Transferase family 6 166 - -
Trre13g02616 177 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 7 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02616 Trre-Chr13 24367461 24368113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02616 5 167 Monolignol Biosynthesis Gene Families AT5G48930 32.927 1.60e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02616 K13065 - gmx:100819383 222.246