Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02608 ATGCTCCTCTCCTTTATGTCTACAAACCAAATTAATAATCACAACACATCAACCTTCCTTCAAACACTTCAAAACTCTCTTAGCCAAGCTTTGGTTATTTACTATCCACTTGCTGGAAGATTGAGTTGGATCAATGGAGCAAGAAGATGGGAAATTCATTGTAATTCCAAAGGAGCACTTTTTTTAGAAGCTAAATGTGAAGAATTAACCAATTTGAATCAATTGGGTGATTTTGTACCAACTAATTTGGTGTCACAACTCATACCAAATATTAATTACAATCTTCCTCTTGAAGACATTCCCTTATTGGCTGTGCAACTAACAAGGTTTCCATGTGGAGGTTTTACGCTAGGCGTTGCTTTATGTCGAGCCGCAACCGATGGAACTGCAACCATGCGGTTTATGAATGCGTGGGCTAAGCTTGCGCGTGGGGAGAATTTGGACCCAAATGAGTTTCCGTGTCATGATCGAACCATTTTAAATTCGCGCAAACTAACACATTTGCCGTCCTTGCATTGGCAGCACCGTGAGTTTAACGCGCCTCTTATTTGGGTGGGTAGTGATTTGAATGGCAATAGAGAAGTCAGTGTTGCTATTGTGAAACTCACCCGAGAACAAGTTTTAAAGCTTAAGAAAAAAGCTAGTTCTCGCGTGAGTTTTCAACCCACCTCCAAAGATGTCCATAGGACAAAACCTTATTCAACTTTTGAGGTTATTGCAGGACATCTTTGGAAGTGTGTTACCAAAGCACGCCACATAGGAAACGATGATCAACCAACGAGGTTGTCCACATTGGTTAATTGTCGAAATCGTTTACACCCACTGCTTCCTAATGGTTATGTTGGGAATGCAGCATTTCCAACCGTGACGCCAACTCGTTCCTTTAATGATCTTATTTGCAAACCTTTGGGTGATGCAGTGGAGGATGTTAAGAAAGCAATTGAAAGGGTGAACGGGGAATATGTAACGTCCGCACTTAATTACATAGATCGCGAGAAGGACATGGATTTATTGAGGTATAATTTTCACTATCCTGCAAAGAGTGTAATTAATGAGGGACAATATAAGGGGAATCCTAATCTTTTTGTTGTAAGTTGGATGAATTTTTCGTATAAGGATGCAAATTTTGGATTGGGTGAACCTGTTTATTTTGGACCAGGGTACATGGATTCTGAAGGAAAGGTATTCATTATGAATAATAATAATGGTGATGGTATTGTGGTGGCTATTTCTTTAGAGTCATCTTGTATGGATAGTTTTAAGAAATATTTTTATGAAGACATTGGAGAGATGTTTTGTAATTCTAAATTGTAG 1314 0.3904 MLLSFMSTNQINNHNTSTFLQTLQNSLSQALVIYYPLAGRLSWINGARRWEIHCNSKGALFLEAKCEELTNLNQLGDFVPTNLVSQLIPNINYNLPLEDIPLLAVQLTRFPCGGFTLGVALCRAATDGTATMRFMNAWAKLARGENLDPNEFPCHDRTILNSRKLTHLPSLHWQHREFNAPLIWVGSDLNGNREVSVAIVKLTREQVLKLKKKASSRVSFQPTSKDVHRTKPYSTFEVIAGHLWKCVTKARHIGNDDQPTRLSTLVNCRNRLHPLLPNGYVGNAAFPTVTPTRSFNDLICKPLGDAVEDVKKAIERVNGEYVTSALNYIDREKDMDLLRYNFHYPAKSVINEGQYKGNPNLFVVSWMNFSYKDANFGLGEPVYFGPGYMDSEGKVFIMNNNNGDGIVVAISLESSCMDSFKKYFYEDIGEMFCNSKL 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02608 437 Pfam Transferase family 13 426 - -
Trre13g02608 437 Gene3D - 1 180 IPR023213 -
Trre13g02608 437 Gene3D - 189 427 IPR023213 -
Trre13g02608 437 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 19 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02608 Trre-Chr13 24229405 24230718 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02608 21 426 Monolignol Biosynthesis Gene Families AT5G48930 37.561 1.52e-78 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02608 K13065 - gmx:100775549 531.946