Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02607 ATGGTGAGTGTCCTATCTCATTCAACTATCATTCCCTCTAAACAAACCCCTAATCCAAAACTCTACTCATTATGTGAACAAATCAAGCTTCGTACTCATGCTCCTCTCCTTTATATTGAGTTGGATCAATGGAGCAAGAAGATGGGAAATTCATTGTTTCCATGTGGAGGTTTTACGCTAGGCGTTGCTTTATGTCGAGCCGCAACCGATGGAACTGCAACCATGCGGTTTATGAATGCGTGGGCTAAGCTTGCGCGTGGGGAGAATTTGGACCCAAATGAGTTTCCGTGTCATGATCGAACCATTTTAAATTCGCGCAAACTAACACATTTGCCGTCCTTGCATTGGCAGCACCGTGAGTTTAACGCGCCTCTTATTTGGGTGGGTAGTGATTTGAATGGCAATAGAGAAGTCAGTGTTGCTATTGTGAAACTCACCCGAGAACAAGTTTTAAAGCTTAAGAAAAAAGCTAGTTCTCGCGTGAGTTTTCAACCCACCTCCAAAGATGTCCATAGGACAAAACCTTATTCAACTTTTGAGGTTATTGCAGGACATCTTTGGAAGTGTGTTACCAAAGCACGCCACATAGGAAACGATGATCAACCAACGAGGTTGTCCACATTGGTTAATTGTCGAAATCGTTTACACCCACTGCTTCCTAATGGTTATGTTGGGAATGCAGCATTTCCAACCGTGACGCCAACTCGTTCCTTTAATGATCTTATTTGCAAACCTTTGGGTGATGCAGTGGAGGATGTTAAGAAAGCAATTGAAAGGGTGAACGGGGAATATGTAACGTCCGCACTTAATTACATAGATCGCGAGAAGGACATGGATTTATTGAGGTATAATTTTCACTATCCTGCAAAGAGTGTAATTAATGAGGGACAATATAAGGGGAATCCTAATCTTTTTGTTGTAAGTTGGATGAATTTTTCGTATAAGGATGCAAATTTTGGATTGGGTGAACCTGTTTATTTTGGACCAGGGTACATGGATTCTGAAGGAAAGGTATTCATTATGAATAATAATAATGGTGATGGTATTGTGGTGGCTATTTCTTTAGAGTCATCTTGTATGGATAGTTTTAAGAAATATTTTTATGAAGACATTGGAGAGATGTTTTGTAATTCTAAATTGTAG 1143 0.4007 MVSVLSHSTIIPSKQTPNPKLYSLCEQIKLRTHAPLLYIELDQWSKKMGNSLFPCGGFTLGVALCRAATDGTATMRFMNAWAKLARGENLDPNEFPCHDRTILNSRKLTHLPSLHWQHREFNAPLIWVGSDLNGNREVSVAIVKLTREQVLKLKKKASSRVSFQPTSKDVHRTKPYSTFEVIAGHLWKCVTKARHIGNDDQPTRLSTLVNCRNRLHPLLPNGYVGNAAFPTVTPTRSFNDLICKPLGDAVEDVKKAIERVNGEYVTSALNYIDREKDMDLLRYNFHYPAKSVINEGQYKGNPNLFVVSWMNFSYKDANFGLGEPVYFGPGYMDSEGKVFIMNNNNGDGIVVAISLESSCMDSFKKYFYEDIGEMFCNSKL 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02607 380 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 53 367 - -
Trre13g02607 380 Pfam Transferase family 53 369 - -
Trre13g02607 380 Gene3D - 2 122 IPR023213 -
Trre13g02607 380 Gene3D - 132 370 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02607 Trre-Chr13 24229308 24230718 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02607 51 369 Monolignol Biosynthesis Gene Families AT5G48930 36.842 2.43e-55 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02607 K13065 - gmx:100775549 402.905