Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02503 ATGAGAGATTATAGTTACTTGTTGGTTGATTTAGATTGGTGTTATGAGAACCAAATAAACAGAATTTTAGCAAAGAAAGCAATTAGAAAGGAATGGAGATTTCGATCACAAGATTCAATTGATCTTCAGTCGGATCTACTTGAGTTGGAGGCACCAATTCCAGAATTGAGAGCTATTCAGTTGTGGCAACATAATCCACCCCAATTTGATATTATGGAACAAGCATTGCTTCGCATCAGAATAGAGAACAACATTATGGCAATACGAAGGGTGCAGGTTCAAAGATGGAGAGATGCTTTGACACAAGTGTCCAGTTACTCTGGATGGGACTCCAAGGGCCAGCATGAGGCATCACTAGTGGAAAACATTGCTCAACACATACATAGAAAGTTGGTACCTAAATTTCCATCTTGTACAGAAAACCTTGTTGGTATTTCTTCAAAGGTAGACCAAGTGAACAAGCTGATAGAAAGTTATGCTATCCCACCTGAACTGTGCAACCATGAGCTTGCTTGTTATTTGTTTTCACGTAATGGTAAGAAGTTGATCAGCACCAGGAGATTACCTCCTATGGATCCATGTTCTCCTCACCTTTATATTCTATACCTGTCCATTGATCAATTTAGCGACGAAATTCTGAAAGATGATTTCTGGAGTGACATTGAATTTGCATTGAAATGTTATTGCTGTAATTCATTGCAAGTAGTGAGGTGTGGTTGGTTGCCGTTTGCACGCAGAAACATGTGTAGCTTGAATGATCGAGCTGACATCATCCACAATGATCAAGGCAATAGAACCACACCTTCTTTTGATGCTTTCGCTGATTCAAAAAGGTTGATTAGTAATGCTGCTAAAAATCAGGCTGCCTCAAACCCAACCAATACTATAGTTGATGCAAAGAGGTTAATTGGAAGGAGATATAGTGATTCCATTATTCAGAACGATATAAAGTTGTGGCCCTTTACGGTCATTTGCTGGTATTAA 984 0.3902 MRDYSYLLVDLDWCYENQINRILAKKAIRKEWRFRSQDSIDLQSDLLELEAPIPELRAIQLWQHNPPQFDIMEQALLRIRIENNIMAIRRVQVQRWRDALTQVSSYSGWDSKGQHEASLVENIAQHIHRKLVPKFPSCTENLVGISSKVDQVNKLIESYAIPPELCNHELACYLFSRNGKKLISTRRLPPMDPCSPHLYILYLSIDQFSDEILKDDFWSDIEFALKCYCCNSLQVVRCGWLPFARRNMCSLNDRADIIHNDQGNRTTPSFDAFADSKRLISNAAKNQAASNPTNTIVDAKRLIGRRYSDSIIQNDIKLWPFTVICWY 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02503 327 SUPERFAMILY Actin-like ATPase domain 251 324 IPR043129 -
Trre13g02503 327 FunFam Heat shock protein ssb1 297 325 - -
Trre13g02503 327 Gene3D - 245 325 - -
Trre13g02503 327 FunFam heat shock 70 kDa protein-like 248 320 - -
Trre13g02503 327 PRINTS 70kDa heat shock protein signature 284 292 - -
Trre13g02503 327 PRINTS 70kDa heat shock protein signature 262 274 - -
Trre13g02503 327 Gene3D - 70 135 IPR035897 -
Trre13g02503 327 PANTHER HEAT SHOCK PROTEIN 70KDA 255 325 IPR013126 GO:0005524|GO:0140662
Trre13g02503 327 Pfam Hsp70 protein 252 323 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02503 Trre-Chr13 22816298 22819836 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02503 252 323 Calmodulin-binding Proteins AT3G09440 70.833 1.51e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02503 K03283 - mtr:11428962 132.109