Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02451 ATGGAAAGCCAAGACCCACCAAACCCACCACCACCATTAATGATGCCGCCGTCACCACCACCGCCACCTGAAAATAACACCTTCTTTTTTACTCCCTTACAAAATTACCCTTTGGAATCTCAAGATCAAGGTCTTGGTGATATTGATTGGGGTAATTTTTTCTTAGGTCAAAATAATAATAACAACTTACTTGTTGGGGATGCTAAGGTGACATTAATGGATAATATTCAATGCACATCTTCTTCTTCTAATTTGTTGGTGAATAATAATGAAAGTGGGAGTTATCAATTGCATGAGGAAGAAAAAGGAAACAAAGAGGAGAAAAGAGTTAAAGGTGGGAGATTGAAGAAGACAACAAAAGTACCAAGGTTTGCATTTCAGACAAGAAGTGTTGATGATATTTTGGATGATGGTTATCGTTGGAGGAAATATGGACAAAAAGCTGTCAAGAATAGCACATATCCCAGAAGCTACTATCGATGCACGCATCACACTTGCAATGTGAAGAAACAAGTGCAAAGGCTATCCAAAGACACTAGCATTGTGGTGACTACGTATGAGGGAATTCATAACCACCCATGCGAGAAGCTCATGGAAACCCTAACTCCTCTTCTAAAGCAAATACAATTTCTTGCTAGCTTGTAA 645 0.3891 MESQDPPNPPPPLMMPPSPPPPPENNTFFFTPLQNYPLESQDQGLGDIDWGNFFLGQNNNNNLLVGDAKVTLMDNIQCTSSSSNLLVNNNESGSYQLHEEEKGNKEEKRVKGGRLKKTTKVPRFAFQTRSVDDILDDGYRWRKYGQKAVKNSTYPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGIHNHPCEKLMETLTPLLKQIQFLASL 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02451 214 ProSiteProfiles WRKY domain profile. 130 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre13g02451 214 Gene3D WRKY domain 120 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre13g02451 214 MobiDBLite consensus disorder prediction 1 27 - -
Trre13g02451 214 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 81 196 IPR044810 GO:0003700
Trre13g02451 214 SMART WRKY_cls 135 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre13g02451 214 SUPERFAMILY WRKY DNA-binding domain 129 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre13g02451 214 FunFam WRKY transcription factor 57 121 195 - -
Trre13g02451 214 Pfam WRKY DNA -binding domain 136 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02451 Trre-Chr13 21978687 21981072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02451 111 214 WRKY Transcription Factor Family AT5G41570 74.528 1.92e-56 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre13g02451 WRKY 2.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02451 - - cam:101497701 269.626