Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02447 ATGACAGTACCTGAAACAGAACCAAACAATCAACAAGCTGAAACAATGAAATCGGAGGAGAGAAACATTGAAAACCTTGAGAAGAATAGTGTAACCAGTCTGAGAACTTTGGTCAATATTGGGTCAGAGGTTTTTGTTCAGGCAGAAGTGTATGCCATATTTGGGTCTTCTCGCCAGCTTGCAGTTGGCCCGGTAGCATTGGTTTCTCTGTTGGTCTCTAATGTTCTAGGCAGTGTAGCTGATTCATTCAGTGAAGTATACACAGAGTTGGCAATTTTACTGGCCCTTATGGTTAGGATACTGGAGTGCATAATGGGACTATTGAGGCTTGGGTGGCTGATCCGTTTCATTAGCCATTATGTAATCTCTGGCTTTACATCTGCTTCAGCTATTGTGATTGGTTTATCTCAAGCAAAGTACTTTTTGGGGTACGATATAGACAGAAGTAGCAAGATTATACCGTTAGTTAAAAGTATAATAGCTGGAGCTGATAAGTTTTCATGGCCCCCTTTTGTATTGGGATCAGTTATGTTTGCAATACTTCTTGTCATGAAACACCTGGGAAAATCAAGGAAATACTTGCGATTCTTGAGAGCTGCAGATCCTCTTATAGCAGTAGTCCTGGGAAGTGGGAACACTCTTTGTAAAAATACTTCACCCACCATCAATTTCTTTGGTGGGAGAAATACCTATGGGCCTCCCCAAATTTTCTGTGTGGCTATACTGGAATCAGTAGGAATCGCAAAGGCGTTAGCAGTAAAGAATGGGTATGAGTTGGATTCAAATCAAGAGTTGTTCGGTCTTGGTGTTTCCAATGTTCTTGGTTCATTTCTTTTCAGCATACCCTACTACAGGTTCCTTTTCAAGATCAGCTGTTAA 879 0.4107 MTVPETEPNNQQAETMKSEERNIENLEKNSVTSLRTLVNIGSEVFVQAEVYAIFGSSRQLAVGPVALVSLLVSNVLGSVADSFSEVYTELAILLALMVRILECIMGLLRLGWLIRFISHYVISGFTSASAIVIGLSQAKYFLGYDIDRSSKIIPLVKSIIAGADKFSWPPFVLGSVMFAILLVMKHLGKSRKYLRFLRAADPLIAVVLGSGNTLCKNTSPTINFFGGRNTYGPPQIFCVAILESVGIAKALAVKNGYELDSNQELFGLGVSNVLGSFLFSIPYYRFLFKISC 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02447 292 Coils Coil 9 36 - -
Trre13g02447 292 PANTHER SULFATE TRANSPORTER 45 282 IPR001902 GO:0016020|GO:0055085
Trre13g02447 292 Pfam Sulfate permease family 236 284 IPR011547 GO:0016020
Trre13g02447 292 Pfam Sulfate permease family 45 209 IPR011547 GO:0016020
Trre13g02447 292 MobiDBLite consensus disorder prediction 1 22 - -
Trre13g02447 292 MobiDBLite consensus disorder prediction 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02447 Trre-Chr13 21942898 21946860 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02447 45 282 Inorganic Solute Cotransporters AT3G12520 61.868 9.72e-95 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02447 K18059 - gmx:100775789 333.183