Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02442 ATGTATGGATTTAGTGCATTGTTATCTTCAAATGAGTTAGAAAATCTTAAGAACATTGATGGCTTTGTTGCAGCATATCAAGACAGAACAGCTACAATTGACACAACTCACACCTTTGAATTTCTCTCCCTAGATTCTCCAAATGGACTATGGCATGCTTCAAATTTCGGAGACGATATCGTTGTTGGTGTTATTGATTCCGGTGTGTGGCCAGAGAGTCAAAGCTTTAAAGATGATGGAATGACAAAGAAATTTCCAAACAAATGGAAGGGAACATGTGAAACTGGTCAAGAATTCAATGCTTCAATGTGTAACTTCAAATTGATTGGAGCTAGATATTTCAACAAAGGTGTTATTGCTTCAAATCCAAATGTTACAACAGTCTCCATGAACTCAGCTAGAGATATTATAGGACATGGAACTCACACATCATCAACTGTTGCAGGTAACTATGTTAATGGTGCTTCTTATTTTGGTTATGCAAAAGGAGTAGCAAGAGGAATTGCACCAAAAGCTAGGCTTGCTATGTACAAAGTGATTTGGGAAGAAGGTCTTTTGGCTTCGGATGTTTTGGCCGGAATGGACCAAGCAATTATTGATGGTGTTGATGTGATTTCAATTTCAATGGGATTTGATGATAGTCCAATTTATGAAGATCCTATAGCAATAGCTTCATTTGCAGCAATGGAAAAAGGGATTGTTGTTTCATCTTCTGCAGGTAATGCAGGACCTAACCTTGGAACCTTGCACAATGGTATCCCTTGGCTCATTACTGTTGCTGCAGGCACAATTGATAGAACCTTTGGTACTCTTGTTTTGGGAAATGGTCAAAAAATTATTGGTTGGACTTTGTTTCCATCAAATGCTACTATAGTTGAAAATCTTCCACTAGTTCACAATAACAATTTATCTTCATGCAACTCAATGAAACTCTTATCTCAACTTTACAAACAAGCCATCATTCTTTGCGACGATGACTCGATATCAAACCCAAGATCAGTGTTTGACCAAATCAATCTTGTTGCAGAAACAGGTGTGTTAGGAGCAATTTTTGTCTCGGATAATCCTGATTTAATTGATTTAGGAAATGTTTACTCTCCGATTATTGTAATCAAGCCAAAAGATGCACAATCTGTTTTCAAATATGCAAAAACAAACAAAAATCCAACTGCAAGCATTAAGTTTCAACAAACATTTGTTGGAATAAACCCAGCACCAGCTGCAGCACATTACTCATCAAGAGGTCCTTCACCAAGCTTTCCTTGGATTTTGAAGCCCGACGTAATGGCACCTGGCTCTAGAGTCCTTGCAGCTTTTGTTCCTATTAAACCATCAGCTAGAATCGGCACAAGTAATTACTTAGCGAGCGACTACAATTTCATGTCTGGAACATCCATGTCTTGTCCTCATGTTTCAGGTGTCGCTGCTCTTCTGAAATCGGCACATCCCGAATGGAGTGCTGCTGCTATAAGATCTGCATTAGTAACCACAGCTAATCCTATGGATAATACACAAAATCCTATACGAGATAATGCGTACCCTTCTCAACATGCTTCTCCTCTAGCTATTGGCGCGGGTGAGATTGATCCTAATAGAGCAATGAATCCAGGTTTGATATATGATGCTACACCACAAGACTATGTTAATCTTCTTTGCGCATTGAAGTTCACAAAGAACCAAATTTTAACAATTACAAGATCAACTTCTTATGATTGTGAAAACCCTTCTTTGGATCTTAATTACCCTTCATTGATAGCATTATATAGCAATGAAACAACATCAATGGTTCAGAAATTTAAGAGAACTGTTACCAATGTTGGAGATGGTGCTGCTACATATAAAGCTAAAGTGACACAACCCAAAGGTTGTGTTGTGACAGTGTCACCTGAAATATTAAATTTCAGTTATAAAAATGAGAAACAAAGTTACTACATAAACATAAACATAAACTATGTTGTGTACAAGAAGAGTAGAATTCCATTTGGGGATCTTACTTGGATTGAAGATGGTGGATCACATACTGTTAGAAGTCCTATTGTAGTGGCACCAAATGGAATTATTTGA 2064 0.3755 MYGFSALLSSNELENLKNIDGFVAAYQDRTATIDTTHTFEFLSLDSPNGLWHASNFGDDIVVGVIDSGVWPESQSFKDDGMTKKFPNKWKGTCETGQEFNASMCNFKLIGARYFNKGVIASNPNVTTVSMNSARDIIGHGTHTSSTVAGNYVNGASYFGYAKGVARGIAPKARLAMYKVIWEEGLLASDVLAGMDQAIIDGVDVISISMGFDDSPIYEDPIAIASFAAMEKGIVVSSSAGNAGPNLGTLHNGIPWLITVAAGTIDRTFGTLVLGNGQKIIGWTLFPSNATIVENLPLVHNNNLSSCNSMKLLSQLYKQAIILCDDDSISNPRSVFDQINLVAETGVLGAIFVSDNPDLIDLGNVYSPIIVIKPKDAQSVFKYAKTNKNPTASIKFQQTFVGINPAPAAAHYSSRGPSPSFPWILKPDVMAPGSRVLAAFVPIKPSARIGTSNYLASDYNFMSGTSMSCPHVSGVAALLKSAHPEWSAAAIRSALVTTANPMDNTQNPIRDNAYPSQHASPLAIGAGEIDPNRAMNPGLIYDATPQDYVNLLCALKFTKNQILTITRSTSYDCENPSLDLNYPSLIALYSNETTSMVQKFKRTVTNVGDGAATYKAKVTQPKGCVVTVSPEILNFSYKNEKQSYYINININYVVYKKSRIPFGDLTWIEDGGSHTVRSPIVVAPNGII 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02442 687 SUPERFAMILY Subtilisin-like 34 538 IPR036852 GO:0004252|GO:0006508
Trre13g02442 687 CDD Peptidases_S8_3 32 499 IPR034197 -
Trre13g02442 687 Pfam Subtilase family 57 511 IPR000209 GO:0006508|GO:0008236
Trre13g02442 687 Gene3D - 551 683 - -
Trre13g02442 687 Gene3D - 265 400 - -
Trre13g02442 687 PRINTS Subtilisin serine protease family (S8) signature 135 148 IPR015500 -
Trre13g02442 687 PRINTS Subtilisin serine protease family (S8) signature 57 76 IPR015500 -
Trre13g02442 687 PRINTS Subtilisin serine protease family (S8) signature 462 478 IPR015500 -
Trre13g02442 687 Pfam Fibronectin type-III domain 578 681 IPR041469 -
Trre13g02442 687 ProSiteProfiles Serine proteases, subtilase domain profile. 38 534 - -
Trre13g02442 687 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 681 IPR045051 -
Trre13g02442 687 CDD PA_subtilisin_like 270 393 - -
Trre13g02442 687 FunFam Subtilisin-like protease SBT1.5 59 274 - -
Trre13g02442 687 ProSitePatterns Serine proteases, subtilase family, serine active site. 463 473 IPR023828 -
Trre13g02442 687 Gene3D Peptidase S8/S53 domain 59 547 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02442 Trre-Chr13 21906675 21909131 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02442 1 681 Subtilisin-like Serine Gene Family AT4G34980 42.756 3.03e-175 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02442 - - var:108328904 1028.85