Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02441 ATGAAGCCTAACTTTGTGTTTTCACTTCTCCTCATTACTCTTTTGTTTCTATTAACCATTCATAGCAATGCTGAAACTTCCACATATATAATTCATATGAACAAATCTTTCTCTCCTAAAGTCTTCACAACTCATCATGAATGGTTTAAATCCACCATTCATTCCTTAAAATCAAAAACATTACTACTTGATGATCATGATTATTATCAATCACATAAGAATCTAGTTTACACCTATGATAATGCCATGTATGGATTTAGTGCATTGTTATCTTCAAATGAGTTAGAAAATCTTAAGAACATTGATGGCTTTGTTGCAGCATATCAAGACAGAACAGCTACAATTGACACAACTCACACCTTTGAATTTCTCTCCCTAGATTCTCCAAATGGACTATGGCATGCTTCAAATTTCGGAGACGATATCGTTGTTGGTGTTATTGATTCCGGTGTGTGGCCAGAGAGTCAAAGCTTTAAAGATGATGGAATGACAAAGAAATTTCCAAACAAATGGAAGGGAACATGTGAAACTGGTCAAGAATTCAATGCTTCAATGTGTAACTTCAAATTGATTGGAGCTAGATATTTCAACAAAGGTGTTATTGCTTCAAATCCAAATGTTACAACAGTCTCCATGAACTCAGCTAGAGATATTATAGGACATGGAACTCACACATCATCAACTGTTGCAGGTAACTATGTTAATGGTGCTTCTTATTTTGGTTATGCAAAAGGAGTAGCAAGAGGAATTGCACCAAAAGCTAGGCTTGCTATGTACAAAGTGATTTGGGAAGAAGGTCTTTTGGCTTCGGATGTTTTGGCCGGAATGGACCAAGCAATTATTGATGGTGTTGATGTGATTTCAATTTCAATGGGATTTGATGATAGTCCAATTTATGAAGATCCTATAGCAATAGCTTCATTTGCAGCAATGGAAAAAGGGATTGTTGTTTCATCTTCTGCAGGTAATGCAGGACCTAACCTTGGAACCTTGCACAATGGTATCCCTTGGCTCATTACTGTTGCTGCAGGCACAATTGATAGAACCTTTGGTACTCTTGTTTTGGGAAATGGTCAAAAAATTATTGGTTGGACTTTGTTTCCATCAAATGCTACTATAGTTGAAAATCTTCCACTAGTTCACAATAACAATTTATCTTCATGCAACTCAATGAAACTCTTATCTCAACTTTACAAACAAGCCATCATTCTTTGCGACGATGACTCGATATCAAACCCAAGATCAGTGTTTGACCAAATCAATCTTGTTGCAGAAACAGGTGTGTTAGGAGCAATTTTTGTCTCGGATAATCCTGATTTAATTGATTTAGGAAATGTTTACTCTCCGATTATTGTAATCAAGCCAAAAGATGCACAATCTGTTTTCAAATATGCAAAAACAAACAAAAATCCAACTGCAAGCATTAAGTTTCAACAAACATTTGTTGGAATAAACCCAGCACCAGCTGCAGCACATTACTCATCAAGAGGTCCTTCACCAAGCTTTCCTTGGATTTTGAAGCCCGACGTAATGGCACCTGGCTCTAGAGTCCTTGCAGCTTTTGTTCCTATTAAACCATCAGCTAGAATCGGCACAAGTAATTACTTAGCGAGCGACTACAATTTCATGTCTGGAACATCCATGTCTTGTCCTCATGTTTCAGGTGTCGCTGCTCTTCTGAAATCGGCACATCCCGAATGGAGTGCTGCTGCTATAAGATCTGCATTAGTAACCACAGCTAATCCTATGGATAATACACAAAATCCTATACGAGATAATGCGTACCCTTCTCAACATGCTTCTCCTCTAGCTATTGGCGCGGGTGAGATTGATCCTAATAGAGCAATGAATCCAGGTTTGATATATGATGCTACACCACAAGACTATGTTAATCTTCTTTGCGCATTGAAGTTCACAAAGAACCAAATTTTAACAATTACAAGATCAACTTCTTATGATTGTGAAAACCCTTCTTTGGATCTTAATTACCCTTCATTGATAGCATTATATAGCAATGAAACAACATCAATGGTTCAGAAATTTAAGAGAACTGTTACCAATGTTGGAGATGGTGCTGCTACATATAAAGCTAAAGTGACACAACCCAAAGGTTGTGTTGTGACAGTGTCACCTGAAATATTAAATTTCAGTTATAAAAATGAGAAACAAAGTTACTACATAAACATAAACATAAACTATGTTGTGTACAAGAAGAGTAGAATTCCATTTGGGGATCTTACTTGGATTGAAGATGGTGGATCACATACTGTTAGAAGTCCTATTGTAGTGGCACCAAATGGAATTATTTGA 2310 0.368 MKPNFVFSLLLITLLFLLTIHSNAETSTYIIHMNKSFSPKVFTTHHEWFKSTIHSLKSKTLLLDDHDYYQSHKNLVYTYDNAMYGFSALLSSNELENLKNIDGFVAAYQDRTATIDTTHTFEFLSLDSPNGLWHASNFGDDIVVGVIDSGVWPESQSFKDDGMTKKFPNKWKGTCETGQEFNASMCNFKLIGARYFNKGVIASNPNVTTVSMNSARDIIGHGTHTSSTVAGNYVNGASYFGYAKGVARGIAPKARLAMYKVIWEEGLLASDVLAGMDQAIIDGVDVISISMGFDDSPIYEDPIAIASFAAMEKGIVVSSSAGNAGPNLGTLHNGIPWLITVAAGTIDRTFGTLVLGNGQKIIGWTLFPSNATIVENLPLVHNNNLSSCNSMKLLSQLYKQAIILCDDDSISNPRSVFDQINLVAETGVLGAIFVSDNPDLIDLGNVYSPIIVIKPKDAQSVFKYAKTNKNPTASIKFQQTFVGINPAPAAAHYSSRGPSPSFPWILKPDVMAPGSRVLAAFVPIKPSARIGTSNYLASDYNFMSGTSMSCPHVSGVAALLKSAHPEWSAAAIRSALVTTANPMDNTQNPIRDNAYPSQHASPLAIGAGEIDPNRAMNPGLIYDATPQDYVNLLCALKFTKNQILTITRSTSYDCENPSLDLNYPSLIALYSNETTSMVQKFKRTVTNVGDGAATYKAKVTQPKGCVVTVSPEILNFSYKNEKQSYYINININYVVYKKSRIPFGDLTWIEDGGSHTVRSPIVVAPNGII 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02441 769 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 115 IPR037045 -
Trre13g02441 769 Pfam Fibronectin type-III domain 660 763 IPR041469 -
Trre13g02441 769 Gene3D Peptidase S8/S53 domain 141 629 IPR036852 GO:0004252|GO:0006508
Trre13g02441 769 FunFam Subtilisin-like protease SBT1.5 141 356 - -
Trre13g02441 769 FunFam Subtilisin-like protease SBT1.9 18 116 - -
Trre13g02441 769 Gene3D - 347 482 - -
Trre13g02441 769 CDD PA_subtilisin_like 352 475 - -
Trre13g02441 769 PRINTS Subtilisin serine protease family (S8) signature 217 230 IPR015500 -
Trre13g02441 769 PRINTS Subtilisin serine protease family (S8) signature 544 560 IPR015500 -
Trre13g02441 769 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Trre13g02441 769 Pfam Subtilase family 139 593 IPR000209 GO:0006508|GO:0008236
Trre13g02441 769 ProSitePatterns Serine proteases, subtilase family, serine active site. 545 555 IPR023828 -
Trre13g02441 769 ProSiteProfiles Serine proteases, subtilase domain profile. 120 616 - -
Trre13g02441 769 Pfam Peptidase inhibitor I9 28 113 IPR010259 -
Trre13g02441 769 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 29 763 IPR045051 -
Trre13g02441 769 SUPERFAMILY Subtilisin-like 116 620 IPR036852 GO:0004252|GO:0006508
Trre13g02441 769 Gene3D - 633 765 - -
Trre13g02441 769 CDD Peptidases_S8_3 114 581 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02441 Trre-Chr13 21906429 21909131 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02441 1 764 Subtilisin-like Serine Gene Family AT5G67360 41.507 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02441 - - gmx:100779169 1100.12