Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02438 ATGGGTGAGGGAAGAAGCAATAGCGCAAGTATTATTTTAATACTAGTATTATGTATGTTGGTGTTTCATTTTAACATGATTCATGCAGACACATACATTGTTGGTGATAGCCAAGGTTGGACCTATGGTGTTTCAAATTGGCCCTTAGGAAAAACTTTCTATGAAGGTGACACACTCGTATTCAGTTACGTTCCTTTAATACATAACGTGGTAATAGTGAATGAAGTTGGATTCAATTATTGTTCAACTCTGGGAGCATCTGGATTATATGCCTCTGGATCAGATAGAATTACACTTGCTAAGGGAGCTAACTACTTCATTTCTGGTTTTCCAGATCAATGCTTACTTGGAATGAAAATTGCAATCAATGCTATAATTAAGCTCTTAATTAATGTATAA 399 0.3509 MGEGRSNSASIILILVLCMLVFHFNMIHADTYIVGDSQGWTYGVSNWPLGKTFYEGDTLVFSYVPLIHNVVIVNEVGFNYCSTLGASGLYASGSDRITLAKGANYFISGFPDQCLLGMKIAINAIIKLLINV 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02438 132 Pfam Plastocyanin-like domain 44 118 IPR003245 GO:0009055
Trre13g02438 132 ProSiteProfiles Phytocyanin domain profile. 30 126 IPR003245 GO:0009055
Trre13g02438 132 PANTHER BLUE COPPER PROTEIN 24 123 IPR039391 GO:0009055
Trre13g02438 132 Gene3D - 30 125 IPR008972 -
Trre13g02438 132 FunFam basic blue protein-like 30 124 - -
Trre13g02438 132 SUPERFAMILY Cupredoxins 31 124 IPR008972 -
Trre13g02438 132 CDD Plantacyanin 31 124 IPR041844 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02438 Trre-Chr13 21863434 21863940 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02438 12 125 Phytocyanin Superfamily AT1G17800 39.669 3.98e-20 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02438 - - psat:127106281 139.813