Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02432 ATGTATGGATTTAGTGCATTGTTATCTTCAAATGAGTTAGAAACTCTTAAGAACATTGATGGCTTTGTTGCAGCATATCAAGATAGAACAGCTACAATTGACACAACTCACACCTTTGAATTTCTCTCCTTAGATTCTCCAAATGGACTATGGCATGCTTCAAATTTCGGAGACGATATCGTTGTTGGTGTTATTGACTCGGGTGTATGGCCAGAGAGTCAAAGCTTTAAAGATGATGGAATGACAAAGAAATTTCCAAATAAATGGAAAGGAACATGTGAAATTGGTCAAGAATTTAATGCTTCAATGTGTAACTTCAAATTGATTGGAGCTAGATATTTCAACAAAGGTGTTATTGCTTCAAATCCAAATGTTACCATCAGCATGAATTCAGCTAGAGACAGTTTAGGACATGGAACTCACACATCATCAACTATTGCAGGTAACTACGTTAATGGCGCTTCTTATTTTGGTTATGCAAAAGGAATAGCAAGAGGCATTGCACCAAAAGCTAAAATTGCTATGTACAAAGTACTTTGGGAAGAAGGCCGTTTCGCCTCCGATGTTTTGGCTGGAATAGACCAAGCAATTATTGATGGTGTTGATGTGATTTCAATTTCAATGGGATTTGATGATACTCCACTTTATGAAGATCCTATAGCAATAGCTTCATTTGCAGCTATGGAAAAAGGGATTATTGTTTCATCTTCTGCAGGTAACTCAGGACCTCAATTTGGAACCTTGCACAATGGTATCCCTTGGCTCATTACTGCAGCTGCTGGCACCATAGATAGAACTTTTGGTACTCTTGTTTTGGGAAATGGTCAAAACATTATTGGTTGGACTTTGTTTCCAGCAAATGCTATAGTTGAAAATCTTCCACTTTTTTACAATAACAATGTATCTTCATGCAACTCAGTGGAGCTCTTATCTAAACTTAACAAACAAGTCATCATTCTTTGTGATGAATCAATGTCAAACTCAATCACAAATTCAGTGTTTCGACAAATCAGAGCTGTGACAGCAACAAGTATGTTAGGGGCAGTTTTTATCTCTGATAATCCGGGTTTAATTGACACGGGAAATGTTTACTCACCAAGTATCGTAATCAAGCCGAAAGATGCAGAATACGTGATCAACTATGCAAAAAGCGATAAGAATCCTAAAGCAAGCATTAAATTTCAACAAACATTTGTTGGAACAAAGCCAGCACCAGCTGCAGCACATTACTCATCAAGAGGTCCTTCAAATTACTTTCCATGGATTTTGAAACCCGACATAATGGCACCTGGCTCTAGAGTTCTTGCAGCTTTTATTCCTACTAAACCATCAGCTAGAATCGGCACAAATGTGTACTTATCAAATGACTACACTTTCATGTCAGGAACATCCATGTCTTGTCCTCATGTTTCCGGTGTTGTTGCTCTTCTGAAATCGGCACATCCACAATGGAGTGTTGCGGCTATAAGATCGGCATTAATAACCACAGCTAGTCCTTTAGATAATACACAAAATCCTATAAAGGATAATGGCTACCCTTCTCAATATGCTTCTCCTCTCGCTATTGGCGCGGGCGAGATTGATCCTAATAGAGCAATGAATCCAGGTTTGATATATGATGCTACACCACAAGATTACGTTAATCTTCTTTGCGGTTTGAACTTCACAAAGAACCAAATTTTAACAATTACAAGATCAAATTCTTATGATTGTGAAAACCCTTCTTTGGATCTTAATTACCCTTCATTTATAGCATTATATAGCAACAAAACAAGATCAATGGTTAAGAAATTTAAGAGGACTGTTACTAATGTTGGTGATGGTGCTGCTACATATAGAGCTAAATTGACATATCCAAAAGGTTGTGTGGTGAAAGTGTCACCTAATATATTAAATTTCAGTTATAGAAATGAGAAACAAAGTTACTATATTAACATAGAGTATGTCATGTACAAGAATGAAAATGTTTCATTTGGGGATCTTGTTTGGATTGAAGATGGTGGAACACACACTGTTAGAAGTCCTATTGTAATAGCACCAAGTGGAATCATATGA 2055 0.3698 MYGFSALLSSNELETLKNIDGFVAAYQDRTATIDTTHTFEFLSLDSPNGLWHASNFGDDIVVGVIDSGVWPESQSFKDDGMTKKFPNKWKGTCEIGQEFNASMCNFKLIGARYFNKGVIASNPNVTISMNSARDSLGHGTHTSSTIAGNYVNGASYFGYAKGIARGIAPKAKIAMYKVLWEEGRFASDVLAGIDQAIIDGVDVISISMGFDDTPLYEDPIAIASFAAMEKGIIVSSSAGNSGPQFGTLHNGIPWLITAAAGTIDRTFGTLVLGNGQNIIGWTLFPANAIVENLPLFYNNNVSSCNSVELLSKLNKQVIILCDESMSNSITNSVFRQIRAVTATSMLGAVFISDNPGLIDTGNVYSPSIVIKPKDAEYVINYAKSDKNPKASIKFQQTFVGTKPAPAAAHYSSRGPSNYFPWILKPDIMAPGSRVLAAFIPTKPSARIGTNVYLSNDYTFMSGTSMSCPHVSGVVALLKSAHPQWSVAAIRSALITTASPLDNTQNPIKDNGYPSQYASPLAIGAGEIDPNRAMNPGLIYDATPQDYVNLLCGLNFTKNQILTITRSNSYDCENPSLDLNYPSFIALYSNKTRSMVKKFKRTVTNVGDGAATYRAKLTYPKGCVVKVSPNILNFSYRNEKQSYYINIEYVMYKNENVSFGDLVWIEDGGTHTVRSPIVIAPSGII 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02432 684 CDD PA_subtilisin_like 269 392 - -
Trre13g02432 684 FunFam Subtilisin-like protease SBT1.5 59 273 - -
Trre13g02432 684 Gene3D Peptidase S8/S53 domain 59 546 IPR036852 GO:0004252|GO:0006508
Trre13g02432 684 CDD Peptidases_S8_3 32 498 IPR034197 -
Trre13g02432 684 PRINTS Subtilisin serine protease family (S8) signature 57 76 IPR015500 -
Trre13g02432 684 PRINTS Subtilisin serine protease family (S8) signature 134 147 IPR015500 -
Trre13g02432 684 PRINTS Subtilisin serine protease family (S8) signature 461 477 IPR015500 -
Trre13g02432 684 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 677 IPR045051 -
Trre13g02432 684 Pfam Subtilase family 57 504 IPR000209 GO:0006508|GO:0008236
Trre13g02432 684 ProSiteProfiles Serine proteases, subtilase domain profile. 38 533 - -
Trre13g02432 684 Gene3D - 550 680 - -
Trre13g02432 684 SUPERFAMILY Subtilisin-like 34 537 IPR036852 GO:0004252|GO:0006508
Trre13g02432 684 Gene3D - 264 399 - -
Trre13g02432 684 Pfam Fibronectin type-III domain 577 678 IPR041469 -
Trre13g02432 684 ProSitePatterns Serine proteases, subtilase family, serine active site. 462 472 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02432 Trre-Chr13 21776137 21778325 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02432 1 666 Subtilisin-like Serine Gene Family AT5G67090 43.750 1.80e-173 511