Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02431 ATGGAGCTTAAATTTATGTTTTCAACTCTCTTCATTACTCATTTTTTTCTAATAACCTTTCATACCAATGCTGAGACTTCAACATATATAATTCATATGAACAAATCCTTATTTCCTCAAATTTTCATAACTCATCATGATTGGTTCAAATCCACCATTCATTCCTTAAATTCAAAAACACTACTACTTCATGATCATGATCAACATGCACAAAAGAAACTCTTGTACACCTATGATAATGCCATGTATGGATTTAGTGCATTGTTATCTTCAAATGAGTTAGAAACTCTTAAGAACATTGATGGCTTTGTTGCAGCATATCAAGATAGAACAGCTACAATTGACACAACTCACACCTTTGAATTTCTCTCCTTAGATTCTCCAAATGGACTATGGCATGCTTCAAATTTCGGAGACGATATCGTTGTTGGTGTTATTGACTCGGGTGTATGGCCAGAGAGTCAAAGCTTTAAAGATGATGGAATGACAAAGAAATTTCCAAATAAATGGAAAGGAACATGTGAAATTGGTCAAGAATTTAATGCTTCAATGTGTAACTTCAAATTGATTGGAGCTAGATATTTCAACAAAGGTGTTATTGCTTCAAATCCAAATGTTACCATCAGCATGAATTCAGCTAGAGACAGTTTAGGACATGGAACTCACACATCATCAACTATTGCAGGTAACTACGTTAATGGCGCTTCTTATTTTGGTTATGCAAAAGGAATAGCAAGAGGCATTGCACCAAAAGCTAAAATTGCTATGTACAAAGTACTTTGGGAAGAAGGCCGTTTCGCCTCCGATGTTTTGGCTGGAATAGACCAAGCAATTATTGATGGTGTTGATGTGATTTCAATTTCAATGGGATTTGATGATACTCCACTTTATGAAGATCCTATAGCAATAGCTTCATTTGCAGCTATGGAAAAAGGGATTATTGTTTCATCTTCTGCAGGTAACTCAGGACCTCAATTTGGAACCTTGCACAATGGTATCCCTTGGCTCATTACTGCAGCTGCTGGCACCATAGATAGAACTTTTGGTACTCTTGTTTTGGGAAATGGTCAAAACATTATTGGTTGGACTTTGTTTCCAGCAAATGCTATAGTTGAAAATCTTCCACTTTTTTACAATAACAATGTATCTTCATGCAACTCAGTGGAGCTCTTATCTAAACTTAACAAACAAGTCATCATTCTTTGTGATGAATCAATGTCAAACTCAATCACAAATTCAGTGTTTCGACAAATCAGAGCTGTGACAGCAACAAGTATGTTAGGGGCAGTTTTTATCTCTGATAATCCGGGTTTAATTGACACGGGAAATGTTTACTCACCAAGTATCGTAATCAAGCCGAAAGATGCAGAATACGTGATCAACTATGCAAAAAGCGATAAGAATCCTAAAGCAAGCATTAAATTTCAACAAACATTTGTTGGAACAAAGCCAGCACCAGCTGCAGCACATTACTCATCAAGAGGTCCTTCAAATTACTTTCCATGGATTTTGAAACCCGACATAATGGCACCTGGCTCTAGAGTTCTTGCAGCTTTTATTCCTACTAAACCATCAGCTAGAATCGGCACAAATGTGTACTTATCAAATGACTACACTTTCATGTCAGGAACATCCATGTCTTGTCCTCATGTTTCCGGTGTTGTTGCTCTTCTGAAATCGGCACATCCACAATGGAGTGTTGCGGCTATAAGATCGGCATTAATAACCACAGCTAGTCCTTTAGATAATACACAAAATCCTATAAAGGATAATGGCTACCCTTCTCAATATGCTTCTCCTCTCGCTATTGGCGCGGGCGAGATTGATCCTAATAGAGCAATGAATCCAGGTTTGATATATGATGCTACACCACAAGATTACGTTAATCTTCTTTGCGGTTTGAACTTCACAAAGAACCAAATTTTAACAATTACAAGATCAAATTCTTATGATTGTGAAAACCCTTCTTTGGATCTTAATTACCCTTCATTTATAGCATTATATAGCAACAAAACAAGATCAATGGTTAAGAAATTTAAGAGGACTGTTACTAATGTTGGTGATGGTGCTGCTACATATAGAGCTAAATTGACATATCCAAAAGGTTGTGTGGTGAAAGTGTCACCTAATATATTAAATTTCAGTTATAGAAATGAGAAACAAAGTTACTATATTAACATAGAGTATGTCATGTACAAGAATGAAAATGTTTCATTTGGGGATCTTGTTTGGATTGAAGATGGTGGAACACACACTGTTAGAAGTCCTATTGTAATAGCACCAAGTGGAATCATATGA 2298 0.3625 MELKFMFSTLFITHFFLITFHTNAETSTYIIHMNKSLFPQIFITHHDWFKSTIHSLNSKTLLLHDHDQHAQKKLLYTYDNAMYGFSALLSSNELETLKNIDGFVAAYQDRTATIDTTHTFEFLSLDSPNGLWHASNFGDDIVVGVIDSGVWPESQSFKDDGMTKKFPNKWKGTCEIGQEFNASMCNFKLIGARYFNKGVIASNPNVTISMNSARDSLGHGTHTSSTIAGNYVNGASYFGYAKGIARGIAPKAKIAMYKVLWEEGRFASDVLAGIDQAIIDGVDVISISMGFDDTPLYEDPIAIASFAAMEKGIIVSSSAGNSGPQFGTLHNGIPWLITAAAGTIDRTFGTLVLGNGQNIIGWTLFPANAIVENLPLFYNNNVSSCNSVELLSKLNKQVIILCDESMSNSITNSVFRQIRAVTATSMLGAVFISDNPGLIDTGNVYSPSIVIKPKDAEYVINYAKSDKNPKASIKFQQTFVGTKPAPAAAHYSSRGPSNYFPWILKPDIMAPGSRVLAAFIPTKPSARIGTNVYLSNDYTFMSGTSMSCPHVSGVVALLKSAHPQWSVAAIRSALITTASPLDNTQNPIKDNGYPSQYASPLAIGAGEIDPNRAMNPGLIYDATPQDYVNLLCGLNFTKNQILTITRSNSYDCENPSLDLNYPSFIALYSNKTRSMVKKFKRTVTNVGDGAATYRAKLTYPKGCVVKVSPNILNFSYRNEKQSYYINIEYVMYKNENVSFGDLVWIEDGGTHTVRSPIVIAPSGII 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02431 765 Gene3D Peptidase S8/S53 domain 140 627 IPR036852 GO:0004252|GO:0006508
Trre13g02431 765 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Trre13g02431 765 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Trre13g02431 765 PRINTS Subtilisin serine protease family (S8) signature 542 558 IPR015500 -
Trre13g02431 765 ProSiteProfiles Serine proteases, subtilase domain profile. 119 614 - -
Trre13g02431 765 Pfam Peptidase inhibitor I9 28 112 IPR010259 -
Trre13g02431 765 Pfam Subtilase family 138 585 IPR000209 GO:0006508|GO:0008236
Trre13g02431 765 Gene3D - 631 761 - -
Trre13g02431 765 SUPERFAMILY Subtilisin-like 115 618 IPR036852 GO:0004252|GO:0006508
Trre13g02431 765 Pfam Fibronectin type-III domain 658 759 IPR041469 -
Trre13g02431 765 FunFam Subtilisin-like protease SBT1.9 18 115 - -
Trre13g02431 765 Gene3D - 345 480 - -
Trre13g02431 765 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 29 758 IPR045051 -
Trre13g02431 765 CDD Peptidases_S8_3 113 579 IPR034197 -
Trre13g02431 765 ProSitePatterns Serine proteases, subtilase family, serine active site. 543 553 IPR023828 -
Trre13g02431 765 FunFam Subtilisin-like protease SBT1.5 140 354 - -
Trre13g02431 765 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 114 IPR037045 -
Trre13g02431 765 CDD PA_subtilisin_like 350 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02431 Trre-Chr13 21776137 21778568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02431 24 747 Subtilisin-like Serine Gene Family AT5G67090 43.029 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02431 - - gmx:100779169 1114.37