Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02423 ATGATAGTTGAAAATCCTAAATTGTCATTGCCAACGGAACTCTTTCCCAACATATACATAGGAAAGACCATGAGTCGTCCCTTTCATGGGAAAATCGCGTGTGAGGTTGCTGGAGCAGTGGCATATATGCATTTTTCAGCTTTTATTCCAATCATTCACAGAGACATCAAACCCACCAACATACTCCTAGACAGTAACTATAGTGCCAAAGTGTCCGATTTTGGGACATCAAGATCAATACCACTAGATAAGACTCACCTAACCACATTTGTAGGTGGAACTTTTGGGTACATAGACCCTGAATATTTCCAGTCCAGTCAATTTACAGATAAGAGTGATGTATATAGATTCGGGGTTGTGCTTGTAGAGCTCATAACCGGTAGAAAGCCGATTTCATTCAGAATTTGA 408 0.402 MIVENPKLSLPTELFPNIYIGKTMSRPFHGKIACEVAGAVAYMHFSAFIPIIHRDIKPTNILLDSNYSAKVSDFGTSRSIPLDKTHLTTFVGGTFGYIDPEYFQSSQFTDKSDVYRFGVVLVELITGRKPISFRI 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02423 135 ProSiteProfiles Protein kinase domain profile. 1 135 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre13g02423 135 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 31 133 IPR045274 GO:0007166
Trre13g02423 135 Pfam Protein kinase domain 27 132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre13g02423 135 SUPERFAMILY Protein kinase-like (PK-like) 7 132 IPR011009 -
Trre13g02423 135 Gene3D Transferase(Phosphotransferase) domain 1 7 134 - -
Trre13g02423 135 ProSitePatterns Serine/Threonine protein kinases active-site signature. 51 63 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02423 Trre-Chr13 21732806 21733213 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02423 23 134 Receptor kinase-like Gene Family AT1G16110 70.536 1.26e-48 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Trre13g02423 Pkinase 1.9e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02423 - - gmx:100792803 195.282