Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02416 ATGGCTTCTCATCTTCATCTTCTTCATGCTCCACCTCTTTCAATTCCCACTAAAACCTTTCATTCCAAACATATTACCATAAAACCACTCAAACCCACTTCAACTTTTCCTTCATCTTCTTCTCTCTTTCAATGTTCCTCAAAAACAACACATAGAGGATCTTGTTCATCATTCATTGCTTTTTCATCATCAAATGGTAGAAGCTCTAATGATTCAGTGGATGATGGTGGTGTTAAGAGTGTGGAGCAAATTGTTGAAGAGAAAAGACGAGCTGAATTGTCTGCTAGAATTGCCTCAGGTGAATTCACTGTCAAACAGGAATCTGGTTTACTTTCAGTATTAAAGAAGAGCTTGTCAAATTTTGGAGTGCCCAATGAGATTCTGGAATTTTTATTTGGGTTGTATCCCAAAATTCCTGAGGCAAAAGGGTCAATTAGTGCCATTCGAAGTGAGGCCTTTTTTATTCCATTGTATGAACTTTACATCACATATGGTGGCATTTTCAGATTGAATTTTGGACCAAAGTCATTTTTGATAGTATCTGATCCGGCTATTGCAAAACACATATTGAAAGACAATGCAAAGGGTTATTCTAAGGGCATCTTGGCTGAGATCCTTGATTTTGTAATGGGGAAAGGACTTATCCCAGCTGATGGGGAAATATGGAAAGTTAGACGGCGTACTATAGTTCCAGCATTGCATCTGAAGTTTGTAGCAGCTATGATTGGCCTTTTTGGACAAGCTACAGATAGGCTCTGCAAGAAGCTAGACGCAGCTGCATCTGACGGAGAAGATGTTGAGATGGAGTCACTTTTCTCTCGATTGACGTTGGATATCATTGGCAAAGCAGTGTTCAATTATGATTTTGATAGTTTATCAAATGACACTGGTATAATTGAGGCTGTATATACTGTACTGAGAGAAGCAGAAGATCGAAGTGTTTCTCCAATTCCAGTCTGGGATCTTCCAATATGGAAAGACATATCCCCGCGTCAAAGGAAGGTTACTGCAGCTCTGAAACTTGTCAACGATACACTTAATAATCTCATAGCAATATGCAAGAGAATGGTGGATGAAGAAGAGCTACAGTTTCACGAGGAGTACATGAATGAACAAGATCCAAGTATTCTGCACTTCTTGTTGGCGTCAGGAGATGATGTGACAAGTAAACAACTTCGTGATGACTTAATGACAATGCTAATTGCTGGACATGAAACATCAGCCGCTGTTTTAACTTGGACCTTTTATCTTCTTTCAAAGGATCCTACTGTCATGTCCAAGCTCCAAGAAGAGGTTGACTCAGTACTTGGTGATCGGTTTCCAACTATTGAAGACATGAAGAAACTCAAATATACAACTCGAGTGATCAACGAGTCATTGAGGCTTTACCCTCAACCACCTGTGTTGATTCGTCGCTCTCTTGATAATGATGTTCTTGGAGAGTATCCTATAAAAAGAGGAGAAGATATCTTTATATCTGTCTGGAACCTGCATCGCAGTCCAACACTGTGGGATGGTGCTGATAAGTTTGATCCTGAAAGATGGCCATTAGATGGACCTAACCCTAATGAGACCAATCAAAACTTCAAATATCTTCCATTTGGTGGAGGACCACGAAAATGTATAGGAGATATGTTTGCTTCATATGAGACTATAGTAGCCCTTGCAATGCTTGTTAGACGGTTCAACTTTCAAATGGCAATTGGAGCTCCACCAGTTGTGATGACTACTGGAGCCACAATTCATACAACACAAGGGTTGAACATGACGGTAACGCGCAGAACAAAACCTCCTATCGTGCCCTCATTACAGATATCAACATTGGAAGTGAATCCATCCATAAGCATTTCTGATAAAGAGGAAATTGGTCAGAAAGACCAAGTTTATCAAGCTCAAAACTCCTGA 1905 0.4 MASHLHLLHAPPLSIPTKTFHSKHITIKPLKPTSTFPSSSSLFQCSSKTTHRGSCSSFIAFSSSNGRSSNDSVDDGGVKSVEQIVEEKRRAELSARIASGEFTVKQESGLLSVLKKSLSNFGVPNEILEFLFGLYPKIPEAKGSISAIRSEAFFIPLYELYITYGGIFRLNFGPKSFLIVSDPAIAKHILKDNAKGYSKGILAEILDFVMGKGLIPADGEIWKVRRRTIVPALHLKFVAAMIGLFGQATDRLCKKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDTGIIEAVYTVLREAEDRSVSPIPVWDLPIWKDISPRQRKVTAALKLVNDTLNNLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVTSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKDPTVMSKLQEEVDSVLGDRFPTIEDMKKLKYTTRVINESLRLYPQPPVLIRRSLDNDVLGEYPIKRGEDIFISVWNLHRSPTLWDGADKFDPERWPLDGPNPNETNQNFKYLPFGGGPRKCIGDMFASYETIVALAMLVRRFNFQMAIGAPPVVMTTGATIHTTQGLNMTVTRRTKPPIVPSLQISTLEVNPSISISDKEEIGQKDQVYQAQNS 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02416 634 PANTHER CYTOCHROME P450 FAMILY 4 161 594 - -
Trre13g02416 634 FunFam Carotene epsilon-monooxygenase, chloroplastic 139 596 - -
Trre13g02416 634 PRINTS E-class P450 group I signature 411 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g02416 634 PRINTS E-class P450 group I signature 493 517 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g02416 634 PRINTS E-class P450 group I signature 541 564 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g02416 634 PRINTS E-class P450 group I signature 391 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g02416 634 PRINTS E-class P450 group I signature 453 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g02416 634 PRINTS E-class P450 group I signature 531 541 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g02416 634 PRINTS E-class P450 group I signature 275 293 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g02416 634 PRINTS E-class P450 group I signature 161 180 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g02416 634 SUPERFAMILY Cytochrome P450 149 594 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g02416 634 Pfam Cytochrome P450 158 576 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g02416 634 Gene3D Cytochrome P450 136 602 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g02416 634 CDD CYP97 155 588 - -
Trre13g02416 634 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 534 543 IPR017972 GO:0005506|GO:0016705
Trre13g02416 634 PRINTS P450 superfamily signature 532 541 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g02416 634 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g02416 634 PRINTS P450 superfamily signature 541 552 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g02416 634 PRINTS P450 superfamily signature 402 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02416 Trre-Chr13 21688240 21693789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02416 77 605 Cytochrome P450 AT1G31800 81.495 0.0 900
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02416 K15747 - gmx:100780770 988.408