Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02382 ATGACTGGAAAAGCGAAGCCAAAGAAGCACACGGCGAAGGAGATCCAAGCAAAGGTGGACGCGGCGTTGACCAATCGCGGCGGCGGCAAAGCAGGTTTGCTTGATCGGATCGGTGTTGAAAAAGGAGGACACGCAAAGTGGGAGTGCCCTCACTGCAAAGTTACAGCACCTGATGTGAAATCGATGCAGATTCATCACGATGCTCGTCATCCAAAGATCCCTTTTGAGGAAGATAAGCTCGTCAATCGTCACGCATCAACTGTTGCTGAATCTTCCAAGCCTCGCCCTGGTGTTCGTGGTAGTCTCAAAAAATGA 315 0.5079 MTGKAKPKKHTAKEIQAKVDAALTNRGGGKAGLLDRIGVEKGGHAKWECPHCKVTAPDVKSMQIHHDARHPKIPFEEDKLVNRHASTVAESSKPRPGVRGSLKK 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02382 104 SUPERFAMILY Expressed protein At2g23090/F21P24.15 27 77 - -
Trre13g02382 104 MobiDBLite consensus disorder prediction 85 104 - -
Trre13g02382 104 PANTHER GEO09665P1-RELATED 1 82 IPR045230 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02382 Trre-Chr13 21432970 21433284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02382 1 104 C2H2 Transcription Factor Family AT3G02790 76.415 8.89e-55 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02382 - - gmx:100788257 195.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g02382 13 21432970 21433284 Trre13g02382 13 21432970 21433284 ECH