Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02358 ATGGGGTCCTGCTTCTCTGCGGAAAGCAGGAGCCCCCACCCCACTTCGCCCTCTTCATCATCTTTTAGGAAGAATAGAAGGAATAGTAGTAAAAAGAAACTTGGATCAAGAACTTCTTCATTTGAGTATTGGGGGAATGAGCCTCTTCATAAGATTCCTGATAGGATGTTCCTTAATGGTTCTTCTCAATTTGCTTCTTTGTTTACTCAACAAGGCAAAAAGGGTACCAACCAAGATGCCATGGTTGTTTGGGAGAACTTTTGTTCTAGAGAAGATACAATATTCTGTGGAGTTTTCGATGGCCACGGTCCATATGGTCATATGGTTGCAAAAAGAGTGAGAGATTCACTTCCTCTAAAACTGAATACTCATTGGGGACTTAATGTATCTGGTGGGGAAGTCCTCAAGGAGATTAGCGTTAATGCTGCAGGAAGCATGAACTCAGAAGATGTTGCATTTGTATCTGCTGATGAGGAATCCAGGGTATCCGTTGATGCTGAGGAAATGGAAAAATTCCCAGAAATGTTTCAAACACTTAAAGAATCTTTTTTAAAGGCATTCAAACTTATGGATAGAGAATTGAAGACACACCAAACAATTGATTGCTTCTGTAGTGGGACAACAGCAGTAACTCTGATTAAGCAGGGTCATAATCTTGTTCTTGGAAATATTGGTGATTCTAGAGCTGTGCTTGGTACAAGAGAAAAAGATAATTCTCTTGCCGCAGTGCAGTTAACTGTGGATTTAAAACCTAATCTTCCAGCTGAAGCAGAGAGAATTCGCAAATGTAAAGGGCGTGTTTTTGCTCTTCATGATGAACCTGAAGTTTGCCGAGTCTGGTTGCCAAACAATGATTCACCTGGACTAGCCATGGCAAGGGCATTTGGAGATTTTTGTCTGAAAGATTTTGGTCTAATATCTGTTCCAGAGGTATCATACAGAAGACTGACTGAGAAAGATGAGTTTGTTGTCATGGCAACAGATGGGATTTGGGATGTGCTATCAAATAAGGAAGTGGTAGACATTATAGCGGGCGCACCGCGGCGTTCAACAGCGGCTAGATCACTGGTTGAGACAGCAGTGAGAGCATGGAGATACAAATATCCAACTTCAAAAGTCGATGACTGTGCTGTGATTTGTCTCTTTCTAGACTCAGGCGTTCAAAATTTGTCGACCGCCTCTCATACCAACAAGTCCAAAGAACAACCTCCTAGTTCAGGAATTGAAGTCAGCAGCAATGGTGATAATGAAGGTGTTTCTGAACCTAATGCTCTACCAAGATCAGGAACATGCAGAGATGTCAATTATAATAACATCGATGAAGAATTTAAGGAAGAGGAAGAGATAGATGCTGAGACAGAAAAAGAATGGTCTGCTCTTGAAGGTGTATCGCGTGTCAACACATTATTAAACCTTCCAAGATTTACTCCTGATAAAGAAGACAAAGCAGCTGCAGAAGCAGGGATGAGAAAACGTAAATGA 1482 0.4136 MGSCFSAESRSPHPTSPSSSSFRKNRRNSSKKKLGSRTSSFEYWGNEPLHKIPDRMFLNGSSQFASLFTQQGKKGTNQDAMVVWENFCSREDTIFCGVFDGHGPYGHMVAKRVRDSLPLKLNTHWGLNVSGGEVLKEISVNAAGSMNSEDVAFVSADEESRVSVDAEEMEKFPEMFQTLKESFLKAFKLMDRELKTHQTIDCFCSGTTAVTLIKQGHNLVLGNIGDSRAVLGTREKDNSLAAVQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVCRVWLPNNDSPGLAMARAFGDFCLKDFGLISVPEVSYRRLTEKDEFVVMATDGIWDVLSNKEVVDIIAGAPRRSTAARSLVETAVRAWRYKYPTSKVDDCAVICLFLDSGVQNLSTASHTNKSKEQPPSSGIEVSSNGDNEGVSEPNALPRSGTCRDVNYNNIDEEFKEEEEIDAETEKEWSALEGVSRVNTLLNLPRFTPDKEDKAAAEAGMRKRK 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02358 493 Gene3D - 59 385 IPR036457 -
Trre13g02358 493 MobiDBLite consensus disorder prediction 1 37 - -
Trre13g02358 493 CDD PP2Cc 63 383 IPR001932 -
Trre13g02358 493 MobiDBLite consensus disorder prediction 473 493 - -
Trre13g02358 493 MobiDBLite consensus disorder prediction 393 432 - -
Trre13g02358 493 MobiDBLite consensus disorder prediction 475 493 - -
Trre13g02358 493 MobiDBLite consensus disorder prediction 1 24 - -
Trre13g02358 493 Pfam Protein phosphatase 2C 170 361 IPR001932 -
Trre13g02358 493 MobiDBLite consensus disorder prediction 393 419 - -
Trre13g02358 493 ProSiteProfiles PPM-type phosphatase domain profile. 64 383 IPR001932 -
Trre13g02358 493 PANTHER PROTEIN PHOSPHATASE 33 381 IPR015655 GO:0004722|GO:0006470
Trre13g02358 493 SUPERFAMILY PP2C-like 59 384 IPR036457 -
Trre13g02358 493 SMART PP2C_4 53 381 IPR001932 -
Trre13g02358 493 FunFam probable protein phosphatase 2C 33 59 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02358 Trre-Chr13 21306217 21309200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02358 1 479 PP2C-type Phosphatase Gene Family AT3G02750 61.321 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02358 - - cam:101510446 791.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g02358 13 21306217 21309200 Trre13g02358 13 21306217 21309200 ECH