Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02351 ATGTGTGGGATATTCGCGTATCTGAATTACAACGTGGATAGAGAGAGAAAATACATCTTACAAGTTCTCTTCAACGGTTTAAGACGGTTAGAGTATCGCGGTTACGATTCCGCCGGAATCGCCATCGATGCTTCCGATTTCACTTCCTCTCCTCCTCTTATCTTCCGTCAAGAAGGAAACATCGATTCTCTCGTCAAATCCGTCTACCAAGATGTTAGTGAAACTGAATTGAACTTGGAGGAAAGTTTCAGAACTCATGCTGGAATTGCGCATACGCGTTGGGCTACACATGGTGAGCCTGCTCCGCGTAATAGTCATCCTCAAACTTCAGGTCCTGCTAATGAATTCATGGTTGTTCACAATGGTGTTATCACTAATTATGAGGTTTTGAAGGCGACACTGATCCGACATGGCTTCACGTTTACATCGGAAACGGATACCGAAGTCATTCCTAAGCTTGCCAAGTTTGTTTATGACAATGCAAATGAAGGTACTTGTGATCAGGTTGTTACCTTCAGTCAAGTTGTTCTGGAAGTTATGAGGCACCTTGAAGGAGCCTATGCACTTATTTTCAAAAGTGTACATTATCCTAATGAATTGATTGCTTGCAAGCGTGGCAGCCCTCTGCTCCTAGGTGTTAAAGAATTGACAGAAAATAAGGAGAATGGTTCAGCATTTGAGGAAAACAAATTCCTATCAAAAGATGGAAAGCCCAAAGAACTGTTTTTGTCCAGTGATGCCAATGCTGTGGTTGAGCATACCAAGAAAGTTCTAGTTATTGAGGATGGCGAAGTTGTGCATCTCAAGGATGGTGGAGCTTCTATTTTAAAGTACGAGAATGACATGGGAGAACTTGGCGCTTCTCTCTCTAGAGCTTCTTCGGTGCGACGTGCATTATCTGTTCTTGAGATGGAGGTTGAGCAAATAAATAAAGGACATTATGAGCATTATATGCAGAAGGAAATTCATGAACAACCAGAGTCTATAACAACCACAATGAGGGGGAGGCTTATACGTCGCGGATCTAGTAAATCCAAGTCTGTTCTGTTGGGTGGACTGAAGGATCACCTCAAAACCATCAGGCGAAGTAGAAGAATAGTTTTCATAGGTTGTGGAACTAGTTATAATGCTGCTTTGGCAGCTAGGCCCATCTTGGAAGAACTTTCTGGAATTCCTGTTACTATGGAAATTGCTAGTGATTTATTGGATCGGGAGGGACCAATATACCGAGAAGATACAGCCGTTTTTGTCAGTCAATCTGGTGAAACTGCAGATACTTTACTTGCATTGCAATATGCTTTAGACAATGGTGCATTATGTGTTGGTATAACAAACACTGTTGGTAGTGCAATAGCAAGGAATACACATTGTGGTGTTCATATAAATGCTGGTGCTGAGATTGGTGTGGCAAGTACCAAGGCATACACAAGCCAAATAGTAGTGATGGCCATGTTGGCTCTTGCAATAGGCGGTGATACTATTTCCAATCAAGCAAGAAGAGAAGCTATTGTAGATGGCCTTCATGAACTGCCAAACAAAGTCAGAGAGGTGCTGGAGCTTGATCAAGAGATGAAGGATTTAGCAAATCTATTGATTGCTGAGCAGTCTCTTCTTGTCTTTGGGAGAGGATACAACTATGCAACTGCTCTGGAGGGAGCTTTGAAAGTAAAGGAAGTGGCACTTATGCATAGTGAAGGGATACTCGCAGGTGAAATGAAGCATGGTCCTTTGGCATTAGTTGATGAAAATCTTCCAATTGTTGTTATAGCTACACGTGATGTTTGCTTCAGCAAACAGCAGTCTGTTATTCAGCAACTTCATGCCCGCAGAGGTCGTCTGATAGTCATGTGTTCAGAAGGGGATGCTGCTTCTGTATGCCCTGGTGAATCTTGTAGGGTAATTGAAGTTCCACAGGTCGAGGACTGTCTTCAACCTGTAATTAATGTAGTTCCATTACAGTTACTGGCATATCATCTCACTGTACTGAGGGGATTTAATGTCGACCAGCCTCGTAATCTTGCCAAGAGTGTTACCACGCAGTAA 2043 0.4263 MCGIFAYLNYNVDRERKYILQVLFNGLRRLEYRGYDSAGIAIDASDFTSSPPLIFRQEGNIDSLVKSVYQDVSETELNLEESFRTHAGIAHTRWATHGEPAPRNSHPQTSGPANEFMVVHNGVITNYEVLKATLIRHGFTFTSETDTEVIPKLAKFVYDNANEGTCDQVVTFSQVVLEVMRHLEGAYALIFKSVHYPNELIACKRGSPLLLGVKELTENKENGSAFEENKFLSKDGKPKELFLSSDANAVVEHTKKVLVIEDGEVVHLKDGGASILKYENDMGELGASLSRASSVRRALSVLEMEVEQINKGHYEHYMQKEIHEQPESITTTMRGRLIRRGSSKSKSVLLGGLKDHLKTIRRSRRIVFIGCGTSYNAALAARPILEELSGIPVTMEIASDLLDREGPIYREDTAVFVSQSGETADTLLALQYALDNGALCVGITNTVGSAIARNTHCGVHINAGAEIGVASTKAYTSQIVVMAMLALAIGGDTISNQARREAIVDGLHELPNKVREVLELDQEMKDLANLLIAEQSLLVFGRGYNYATALEGALKVKEVALMHSEGILAGEMKHGPLALVDENLPIVVIATRDVCFSKQQSVIQQLHARRGRLIVMCSEGDAASVCPGESCRVIEVPQVEDCLQPVINVVPLQLLAYHLTVLRGFNVDQPRNLAKSVTTQ 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02351 680 Pfam SIS domain 360 487 IPR001347 GO:0097367|GO:1901135
Trre13g02351 680 Pfam SIS domain 531 662 IPR001347 GO:0097367|GO:1901135
Trre13g02351 680 CDD GFAT 2 268 IPR047084 -
Trre13g02351 680 Gene3D - 312 679 - -
Trre13g02351 680 Pfam Glutamine amidotransferase domain 83 197 - -
Trre13g02351 680 ProSiteProfiles SIS domain profile. 527 670 IPR001347 GO:0097367|GO:1901135
Trre13g02351 680 FunFam Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 2 292 - -
Trre13g02351 680 Gene3D - 516 665 - -
Trre13g02351 680 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 2 277 IPR029055 -
Trre13g02351 680 PANTHER GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZING 1 680 - -
Trre13g02351 680 CDD SIS_GlmS_GlmD_2 522 678 IPR035490 -
Trre13g02351 680 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 271 IPR017932 -
Trre13g02351 680 CDD SIS_GlmS_GlmD_1 365 490 IPR035466 -
Trre13g02351 680 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 286 IPR029055 -
Trre13g02351 680 SUPERFAMILY SIS domain 311 679 IPR046348 GO:0097367|GO:1901135
Trre13g02351 680 FunFam Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 312 519 - -
Trre13g02351 680 ProSiteProfiles SIS domain profile. 356 495 IPR001347 GO:0097367|GO:1901135
Trre13g02351 680 FunFam Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 520 665 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02351 Trre-Chr13 21244493 21253464 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02351 21 212 PRT Gene Family AT2G16570 25.510 2.92e-08 55.1