Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02350 ATGTGTGGGATATTCGCGTATCTGAATTACAACGTGGATAGAGAGAGAAAATACATCTTACAAGTTCTCTTCAACGGTTTAAGACGGTTAGAGTATCGCGGTTACGATTCCGCCGGAATCGCCATCGATGCTTCCGATTTCACTTCCTCTCCTCCTCTTATCTTCCGTCAAGAAGGAAACATCGATTCTCTCGTCAAATCCGTCTACCAAGATGTTAGTGAAACTGAATTGAACTTGGAGGAAAGTTTCAGAACTCATGCTGGAATTGCGCATACGCGTTGGGCTACACATGGTGAGCCTGCTCCGCGTAATAGTCATCCTCAAACTTCAGGTCCTGCTAATGAATTCATGGTTGTTCACAATGGTGTTATCACTAATTATGAGGTTTTGAAGGCGACACTGATCCGACATGGCTTCACGTTTACATCGGAAACGGATACCGAAGTCATTCCTAAGCTTGCCAAGTTTGTTTATGACAATGCAAATGAAGGTGATCAGGTTGTTACCTTCAGTCAAGTTGTTCTGGAAGTTATGAGGCACCTTGAAGGAGCCTATGCACTTATTTTCAAAAGTGTACATTATCCTAATGAATTGATTGCTTGCAAGCGTGGCAGCCCTCTGCTCCTAGGTGTTAAAGAATTGACAGAAAATAAGGAGAATGGTTCAGCATTTGAGGAAAACAAATTCCTATCAAAAGATGGAAAGCCCAAAGAACTGTTTTTGTCCAGTGATGCCAATGCTGTGGTTGAGCATACCAAGAAAGTTCTAGTTATTGAGGATGGCGAAGTTGTGCATCTCAAGGATGGTGGAGCTTCTATTTTAAAGTACGAGAATGACATGGGAGAACTTGGCGCTTCTCTCTCTAGAGCTTCTTCGGTGCGACGTGCATTATCTGTTCTTGAGATGGAGGTTGAGCAAATAAATAAAGGACATTATGAGCATTATATGCAGAAGGAAATTCATGAACAACCAGAGTCTATAACAACCACAATGAGGGGGAGGCTTATACGTCGCGGATCTAGTAAATCCAAGTCTGTTCTGTTGGGTGGACTGAAGGATCACCTCAAAACCATCAGGCGAAGTAGAAGAATAGTTTTCATAGGTTGTGGAACTAGTTATAATGCTGCTTTGGCAGCTAGGCCCATCTTGGAAGAACTTTCTGGAATTCCTGTTACTATGGAAATTGCTAGTGATTTATTGGATCGGGAGGGACCAATATACCGAGAAGATACAGCCGTTTTTGTCAGTCAATCTGGTGAAACTGCAGATACTTTACTTGCATTGCAATATGCTTTAGACAATGGTGCATTATGTGTTGGTATAACAAACACTGTTGGTAGTGCAATAGCAAGGAATACACATTGTGGTGTTCATATAAATGCTGGTGCTGAGATTGGTGTGGCAAGTACCAAGGCATACACAAGCCAAATAGTAGTGATGGCCATGTTGGCTCTTGCAATAGGCGGTGATACTATTTCCAATCAAGCAAGAAGAGAAGCTATTGTAGATGGCCTTCATGAACTGCCAAACAAAGTCAGAGAGGTGCTGGAGCTTGATCAAGAGATGAAGGATTTAGCAAATCTATTGATTGCTGAGCAGTCTCTTCTTGTCTTTGGGAGAGGATACAACTATGCAACTGCTCTGGAGGGAGCTTTGAAAGTAAAGGAAGTGGCACTTATGCATAGTGAAGGGATACTCGCAGGTGAAATGAAGCATGGTCCTTTGGCATTAGTTGATGAAAATCTTCCAATTGTTGTTATAGCTACACGTGATGTTTGCTTCAGCAAACAGCAGTCTGTTATTCAGCAACTTCATGCCCGCAGAGGTCGTCTGATAGTCATGTGTTCAGAAGGGGATGCTGCTTCTGTATGCCCTGGTGAATCTTGTAGGGTAATTGAAGTTCCACAGGTCGAGGACTGTCTTCAACCTGTAATTAATGTAGTTCCATTACAGTTACTGGCATATCATCTCACTGTACTGAGGGGATTTAATGTCGACCAGCCTCGTAATCTTGCCAAGAGTGTTACCACGCAGTAA 2037 0.4266 MCGIFAYLNYNVDRERKYILQVLFNGLRRLEYRGYDSAGIAIDASDFTSSPPLIFRQEGNIDSLVKSVYQDVSETELNLEESFRTHAGIAHTRWATHGEPAPRNSHPQTSGPANEFMVVHNGVITNYEVLKATLIRHGFTFTSETDTEVIPKLAKFVYDNANEGDQVVTFSQVVLEVMRHLEGAYALIFKSVHYPNELIACKRGSPLLLGVKELTENKENGSAFEENKFLSKDGKPKELFLSSDANAVVEHTKKVLVIEDGEVVHLKDGGASILKYENDMGELGASLSRASSVRRALSVLEMEVEQINKGHYEHYMQKEIHEQPESITTTMRGRLIRRGSSKSKSVLLGGLKDHLKTIRRSRRIVFIGCGTSYNAALAARPILEELSGIPVTMEIASDLLDREGPIYREDTAVFVSQSGETADTLLALQYALDNGALCVGITNTVGSAIARNTHCGVHINAGAEIGVASTKAYTSQIVVMAMLALAIGGDTISNQARREAIVDGLHELPNKVREVLELDQEMKDLANLLIAEQSLLVFGRGYNYATALEGALKVKEVALMHSEGILAGEMKHGPLALVDENLPIVVIATRDVCFSKQQSVIQQLHARRGRLIVMCSEGDAASVCPGESCRVIEVPQVEDCLQPVINVVPLQLLAYHLTVLRGFNVDQPRNLAKSVTTQ 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02350 678 ProSiteProfiles SIS domain profile. 525 668 IPR001347 GO:0097367|GO:1901135
Trre13g02350 678 FunFam Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 2 290 - -
Trre13g02350 678 Pfam Glutamine amidotransferase domain 83 198 - -
Trre13g02350 678 CDD SIS_GlmS_GlmD_2 520 676 IPR035490 -
Trre13g02350 678 ProSiteProfiles SIS domain profile. 354 493 IPR001347 GO:0097367|GO:1901135
Trre13g02350 678 CDD GFAT 2 266 IPR047084 -
Trre13g02350 678 CDD SIS_GlmS_GlmD_1 363 488 IPR035466 -
Trre13g02350 678 PANTHER GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZING 1 678 - -
Trre13g02350 678 Pfam SIS domain 529 660 IPR001347 GO:0097367|GO:1901135
Trre13g02350 678 Pfam SIS domain 358 485 IPR001347 GO:0097367|GO:1901135
Trre13g02350 678 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 2 275 IPR029055 -
Trre13g02350 678 FunFam Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 518 663 - -
Trre13g02350 678 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 269 IPR017932 -
Trre13g02350 678 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 284 IPR029055 -
Trre13g02350 678 Gene3D - 310 677 - -
Trre13g02350 678 Gene3D - 514 663 - -
Trre13g02350 678 FunFam Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 310 517 - -
Trre13g02350 678 SUPERFAMILY SIS domain 309 677 IPR046348 GO:0097367|GO:1901135
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02350 Trre-Chr13 21244493 21253464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02350 21 210 PRT Gene Family AT2G16570 25.773 1.67e-08 55.8