Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02299 ATGGATTCTCTTTCTCTTCTCTTCTCTTATCCACTATTCACCAAAACCCACCCCAAAACCCAAAAACTCTTCACCACCAAACCCTTCTCTCTTCTCTCTAACCACAATCCACCCCACTCTTCTTCATCCACCACAAAAAAAACCTCAATTTCTTATTCTCCTAACCCACTTCAAAATCTCTTTAAAAAATCATGCTTTTCACTTACTCTAATTGACCTCTTCACTCCACTTCATTCCCTTGCTGTTGAATCCACTTCAACACCAACTTTAGCTGAATCAGATGCAGGAAGAATCAACTTAGAAACAATTCTTGTTTCCATTGATGATTTTTTCAACAGATACCCATTTTTTGTTGCTACTTGTAGCTTCATTTATCTTGTTGGTATCCCTTTAGCAGAAGAGTATTTCAGGAAATATAAATTTGTTTCAGCCATTGATGCTTTCAGGAAGCTACGTGATGATGCTGATTCTCAGCTGTTGGATATAAGGGATAGGAAGAATGTGAAGTTTCTTGCTTCTCCTAGTTTGAAGATGTTCAAGAAGGATGTTGTGCAGGTTGAGTTTGTTGAGGGAAATGAAGATGGGTTTGTTAAGAAAGTTTTGGAGAGATTTAAGGATGATGCTTCAAATACTGTTGTCTGTGTTTTAGACAGTTTTGACGGTAATTCCATGAAAGTTGCTGAGTTATTATTCAAGAATGGTTTCAAAGAAGCTTATGCAATCAAAGGTGGAGTTAGAGGCCAGCAAGGATGGATGGCTATACAGGATACCCTTTTGCCTCCTTCTGTGCATATAATCCGAAGGAAAAAGACTAAAGCGCCACAACAGCTGACTACAAATGGAAATGGGGCCATTCAACCAAATGATGATAGTAATAGTGAGAGTGCATTATCCTCTGATATCCCCACTCTTGGAAACCAAGAGACAGAAAATGGTCATGTGAAAAGGTCTGTAGATCCCGATCCGGAAGTGAAAATCAGTTCGGCGGTTTCCTCTTCTCCCTATCCCAATTACCCGGATTTGAAGCCTCCGTCATCTCCAACTCCATCAAAGCCACAATAA 1062 0.3964 MDSLSLLFSYPLFTKTHPKTQKLFTTKPFSLLSNHNPPHSSSSTTKKTSISYSPNPLQNLFKKSCFSLTLIDLFTPLHSLAVESTSTPTLAESDAGRINLETILVSIDDFFNRYPFFVATCSFIYLVGIPLAEEYFRKYKFVSAIDAFRKLRDDADSQLLDIRDRKNVKFLASPSLKMFKKDVVQVEFVEGNEDGFVKKVLERFKDDASNTVVCVLDSFDGNSMKVAELLFKNGFKEAYAIKGGVRGQQGWMAIQDTLLPPSVHIIRRKKTKAPQQLTTNGNGAIQPNDDSNSESALSSDIPTLGNQETENGHVKRSVDPDPEVKISSAVSSSPYPNYPDLKPPSSPTPSKPQ 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02299 353 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 123 251 IPR036873 -
Trre13g02299 353 MobiDBLite consensus disorder prediction 337 353 - -
Trre13g02299 353 MobiDBLite consensus disorder prediction 270 353 - -
Trre13g02299 353 Gene3D - 138 262 IPR036873 -
Trre13g02299 353 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 24 262 IPR044240 -
Trre13g02299 353 MobiDBLite consensus disorder prediction 272 311 - -
Trre13g02299 353 ProSiteProfiles Rhodanese domain profile. 197 260 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02299 Trre-Chr13 20603884 20607313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02299 27 252 Sulfurtransferasese or Rhodanese AT4G01050 31.878 8.42e-23 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02299 - - gmx:100815667 393.275