Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02258 ATGGAGGCAAGAGAGTTGCAATTGGAACCCATAAATCAATACTCAATTGATGAGGTAGCTGAGTATCTTGCAAGTGCAGGCCTTCATTCTACCAAACTTATTCTTGGAGTTGATTTCACCAACAGCAATGAATGGCCAAGAAAGCATTCATTTAAGAGACAAAGTATGCATGACATTGGGAATGGTTTAAATCCCTACGAACAAGCGATATCCATTATAGGGAAAACCTTGGCTGCATTTGATGACGATAACTTGATTCCTTGTTTTGGATTTGGAGATTCATCAACACATGATGAAGATGTCTTTAGTTTCTATCCGGACGGAAGATTTTGCAATGGATTTGATGATGTTTTGAGTCGGTATAGGGAAATTGTTCCTAATATTCGACTTGCAGGAGACCCAAGATCCTTTGCACCAATTGTTGAAATGGCCACGACAATCGTTGAGCGGAGGGGAGGCCAATACCATGTTTTAGTGATAATTTCAAATGGCCAGGTAACAAGGACTATTGACACTCAACATGGGAGGCTTAGTCCACAGGAGCAGAAAACTGTTGATGCCATTTTTCAGGCCAGTAAATTTCCTCTATCAATAGTATTGGTTGGTGTTGGAGATGGACCTTGGGACAAGATGAAGGAGTTTCATGATAATATACCAAATAGGGCCTTTTATAATTTTCAGTTTGTGAATTTCACGGAAATTATGTCAAACAATATTTCTTCTTCACGAAAAGAGGCAGCATTTGCTCTTGCAACATTGACCGAAATTCCTTCTCAATATAAAGCCGCGAGAGAACTTGGTCTCCTGAGGTGGAGAAAGATTGCCCATATAGAAGCAATTGATGGTTCCTTCATTGGAAAAAAGGAAAGTGCAATGGTTTGGCAATATCAAGAAGGATATCTTGATTTTGGGTCATGGCAAGCTAAAGAGCTTCTTGACCATTTGGAGAGCGTGCTTGACAATGAGCCTGTAGTAGTTAAAAGCAGACAACATATTGTTGAAGTAAAGCCTCAGAATGATTTTGGGGCAACGCCGAAGAATGTGATTCGGAGATATCGAGGTGTTAGACATACGCCTTGGATTAGTGGTCACAAAGTTTATGATGCTTACAAAAGTTCTTCATTGTATTGGATATGGGGGAATAAAGATGATAGAGAATTTGCTCTTCCTATATACCGAAAGGATTCAATAAACACCCTACAGAAAGAAAAATCTTTGACCTTGATGGCTTTTATGCGTTACACACGTGACAGTGTGTTTAACATTCATCCAAAATATCATTGGGCCTTACTACTATTATGTGGTAGTTTCCTTGGTTATCAAGCAAAAACCACAACTTCTCCATTTGATTTAGGATTCAAAAAATCAACTAATACACCTCCACAATCACTACTACTTACATTTGGGGAAGCATTTGAAGCATTCTTTCCAGAAATGACACATATAACAAAGTTCATGTTGTGTTATTTTTTGACATTGATGTTGGTTTGTCCACTGGAACCTGGTGTGCAGATTTTTTGTATGTTACTATTGATATCTGCACCCCTCTTTTACTTTCCTGAGCTTTTTCGCAAGTCTTCCGGGGTTAGTGTTGCTCTTGGATCATTTAAGCTGCTTCTAATTTGGTTTGCAATTTTTGGGGCTGTTGGGATTTCTCTAATTTGTGGGCTAGTGACATTGCTAATGGTTTATATTAGCTGGAGATTATTATATAAAGGGAAACCAAGAGTTGGAGAAGTGGAGGTTAGTTTTGATGGTTTGTCTGAGGTTTTTGAAGGATGA 1782 0.3872 MEARELQLEPINQYSIDEVAEYLASAGLHSTKLILGVDFTNSNEWPRKHSFKRQSMHDIGNGLNPYEQAISIIGKTLAAFDDDNLIPCFGFGDSSTHDEDVFSFYPDGRFCNGFDDVLSRYREIVPNIRLAGDPRSFAPIVEMATTIVERRGGQYHVLVIISNGQVTRTIDTQHGRLSPQEQKTVDAIFQASKFPLSIVLVGVGDGPWDKMKEFHDNIPNRAFYNFQFVNFTEIMSNNISSSRKEAAFALATLTEIPSQYKAARELGLLRWRKIAHIEAIDGSFIGKKESAMVWQYQEGYLDFGSWQAKELLDHLESVLDNEPVVVKSRQHIVEVKPQNDFGATPKNVIRRYRGVRHTPWISGHKVYDAYKSSSLYWIWGNKDDREFALPIYRKDSINTLQKEKSLTLMAFMRYTRDSVFNIHPKYHWALLLLCGSFLGYQAKTTTSPFDLGFKKSTNTPPQSLLLTFGEAFEAFFPEMTHITKFMLCYFLTLMLVCPLEPGVQIFCMLLLISAPLFYFPELFRKSSGVSVALGSFKLLLIWFAIFGAVGISLICGLVTLLMVYISWRLLYKGKPRVGEVEVSFDGLSEVFEG 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02258 593 Pfam Trehalose-phosphatase 277 353 IPR003337 GO:0003824|GO:0005992
Trre13g02258 593 SUPERFAMILY vWA-like 32 216 IPR036465 -
Trre13g02258 593 PANTHER COPINE FAMILY PROTEIN 1 14 272 - -
Trre13g02258 593 Pfam Copine 55 269 IPR010734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02258 Trre-Chr13 20117428 20124276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02258 269 338 Trehalose Biosynthesis Gene Families AT2G18700 71.053 2.76e-24 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02258 K16280 - gmx:100799565 416.001