Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02250 ATGTTCTTCATCCATTCTCTTCACCATCCCCAAACTCTTTCTTCATATTCATATTCACACCCCCAATCACCAAACACTATCACCCCAAACCATTATCCTAACAGAAACGGTTACATCAAGTTCCGAACAAACTACCGTGAAAATCTCCGTTACCTAAAAACGTTAACCATAATCAACCCCTACACCAAACCCAACAAACTCCCTCTCCCTGACGCCGTCAACCACATCCTCACCACCGTCACATTCCTCAAATCTCACTCCTTCTCCGACGCCGACATACCCCGTCTCGTCCACCATTCTCCTCATCTCTTCACCACCGCCGTCTCCTCCTCTGACATCTCCCCTGTTTTCACTTTCCTCACCACAGACCTCCTCGCCACCGTTGAAGACTCCCGCGGCCTCATCCTCCGTTGTCCTAACCTCCTCTTCACCGACCCGAACCACTTCCTAAAACCGACTCTCCAATTCCTCAGGGAAATAGGAGTTAATAACCTGAACAAACCAACGAACCGGAATGCACATTTGTTGAACACGCGCGTGGAGAAGCTGCGCTTGAGGGTGAGGTTTATGGAGGAGGTGGTTGGGTTTACGGAGGAGGAAGCGAAGAAATCGTGTGCGAGGTTGCCGGCGATATTGGGATATGATGTGGAGAATAACTTGTGGCCGAAGTTTGTGTATTTGGTGAAAGAGATGGAGAGAGATTTGGAAGAGTTGAAGAAGTTTCCTCAGTATTTTGGGTTTAGTTTGGAGAAGAGGATTGTTCCAAGACATTTGCATTTGAAGGAAAGAGGTGTTAGGATTCCTTTGAATAGAATGTTGATGTGGGGTGATGACAAATTCTATGCAAAGTGGAAGTGA 858 0.472 MFFIHSLHHPQTLSSYSYSHPQSPNTITPNHYPNRNGYIKFRTNYRENLRYLKTLTIINPYTKPNKLPLPDAVNHILTTVTFLKSHSFSDADIPRLVHHSPHLFTTAVSSSDISPVFTFLTTDLLATVEDSRGLILRCPNLLFTDPNHFLKPTLQFLREIGVNNLNKPTNRNAHLLNTRVEKLRLRVRFMEEVVGFTEEEAKKSCARLPAILGYDVENNLWPKFVYLVKEMERDLEELKKFPQYFGFSLEKRIVPRHLHLKERGVRIPLNRMLMWGDDKFYAKWK 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02250 285 Gene3D Transcription termination factor 3, mitochondrial 44 285 IPR038538 -
Trre13g02250 285 PANTHER CGI-12 PROTEIN-RELATED 69 283 IPR003690 GO:0003690|GO:0006355
Trre13g02250 285 Pfam mTERF 129 280 IPR003690 GO:0003690|GO:0006355
Trre13g02250 285 SMART mt_12 132 163 IPR003690 GO:0003690|GO:0006355
Trre13g02250 285 SMART mt_12 94 127 IPR003690 GO:0003690|GO:0006355
Trre13g02250 285 SMART mt_12 166 197 IPR003690 GO:0003690|GO:0006355
Trre13g02250 285 SMART mt_12 202 234 IPR003690 GO:0003690|GO:0006355
Trre13g02250 285 SMART mt_12 235 266 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02250 Trre-Chr13 20008388 20009245 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Trre13g02250 mTERF 2.2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02250 K15032 - gmx:100812333 390.578