Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02247 ATGGGTCGCTCCATTTTTTGTCTAATTCATCACCTTCTTTTTTCTTCACTTCTTATTTTCACTTTGTTGCTCAATGATGTTCATGCCAACAAAAAGTGTTACATTGTATACTTGGGAGCACATTCACATGGTCCAACCCCTTCCACTATTGACCTTGAAATTGCTACATCTTCACATTATGATTTATTGGGTTCAATATTTGGAAGTGAAGAGAAGGCAAAAGATGCAATTATTTATTCATATAATAAACATATCAATGGGTTTGCAGCTATACTTGAAGATGAAGAAGCTGCACAAATTGCAAAAAACCCAAAGGTTGTATCCGTGTTCTTGAGCAAAGAACATAAACTGCACACTACACGTTCATGGGAATTTCTTGGACTACGTGGAAATGATATGAACTCAGCTTGGCAAAAGGGAAGGTTTGGTGAAAATACCATCATAGCTAACATTGATTCAGGTGTTTGGCCCGAATCCATGAGTTTTAACGACAGAGGAATAGGCCCAATTCCAGCAAAGTGGCGTGGGGGTAACATATGTCAAATTAACAAACTCAATGGTTCTAACAAAGTTCCATGCAACAGGAAGCTAATTGGAGCAAGATTTTTCAACAAAGCATTCGAATCATTCAACGGACAACTTCCTCGTTCACAACAAACAGCACGTGACTTTGTAGGCCACGGTACTCACACACTATCAACAGCAGGTGGAAACTTCGTACCAGGTGCAAGTATATTTGGTATTGGAAACGGTACCGTAAAAGGTGGTTCACCGAGATCAAGAGTTGCAACCTACAAAGTGTGTTGGTCACTAACAGATGCTGAGAGTTGTTTTGGTGCTGATGTCTTAGCTGCCATTGATCAAGCAATTAGTGATGGTGTTGATTTAATATCAGTTTCTGCTGGAGGTGAAACTAGTACAAGTTCTGAAGCAATTTTCACTGATGAGGTTTCAATAGGTGCATTTCATGCACTTGCTAGAAATATATTATTGGTTGCTTCAGCTGGAAATGACGGTCCTACCCCTGGAAGTGTTGTTAATGTTGCTCCTTGGGTGTTCACAGTTGCTGCTAGTACATTAGATAGAGACTTCAGCAGTAATATTACCATTGGTAACAAAACAATCACGGGAGCCAGTCTTTTTGTAAACTTGCCTCCTAACCAGTCCTTTACTGTGGTGAATGCTGTTGATGCTAAGTTTGCCAATGCGACAAGTCGAGATGCACAATTTTGTAGACCGGGAACACTTAATCCTTCGAAAGTGAAGGGTAAAATAGTGGCTTGTGTTCGAGAAGGGAAAGTAAAATCAGTTTCTGAGGGTCAAGAAGCTTTATCTGCAGGAGCAAAGGGAGTGATTTTGAAGAATCAACCTAAAGTTAGTGGAAGAACACTTCTTTCTGAGCCTCATGTTTTGTCTACTATCAGTTGGCATGAGGATCATCCAAAAACAAGACAACATAGTATAGACTTAATTCCCACGGACATAAAGTCGGGTACTAAAATAAGAATGTCCCAAGCAAAAGTATTATACGGAAGAAAACCAGCTCCAGTTATGGCTTCATACTCATCTAGAGGACCAAATAAAGTTCAACCATCAATACTTAAGCCTGATGTAACTGCCCCCGGAGTGAACATACTTGCTGCCTATTCGTTGTTTGCAAGTGCGTCTAATTTATTAACAGACACTCGTAAAGGTTTTCCATTCAATGTCATGCAAGGAACTTCTATGTCTTGTCCTCATGTTGTTGGAACTGCGGGACTTATCAAAACGCTTCATCCTAATTGGAGTCCGGCCGCTATTAAATCAGCTATCATGACCACTGCAACCACAAGAGATAACACCAACAGGCCAATTACCGATACATTTGAAAATACACTAGCAAATCCATTTGCATATGGTTCAGGACATATTCGACCCAACAATGCAATAGATCCGGGACTTGTTTATGATCTAACCATTATTGATTACTTAAACTTTTTATGTGCTTCTGGATACAACCAGCAACTAATTTCATCACTTAATTTCAACATGACATTTAAATGTTCAGGATCACATAGCATAAATGACTTGAATTACCCTTCAATCACATTACCAAATCTTGGATTAAATGTTGTTAATGTGACTAGGACAGTTACCAATGTTGGGCCACCAAGTACATATTTTGTAAAAGCCCAATTGCCTGGATATAAAATTAGTGTTGTACCAAATTCCTTGAATTTCAAGAAAATTGGTGAAAAGAAGACATTTCAAGTTAGTTTGCAAGCAACAAATGTGACTCCAAGGAGGAAATACCAATTTGGTGAATTGAAATGGTCAAATGGAAAACACATTGTTAGGAGTCCAATTACTGTTCGACGCAAATGA 2364 0.3892 MGRSIFCLIHHLLFSSLLIFTLLLNDVHANKKCYIVYLGAHSHGPTPSTIDLEIATSSHYDLLGSIFGSEEKAKDAIIYSYNKHINGFAAILEDEEAAQIAKNPKVVSVFLSKEHKLHTTRSWEFLGLRGNDMNSAWQKGRFGENTIIANIDSGVWPESMSFNDRGIGPIPAKWRGGNICQINKLNGSNKVPCNRKLIGARFFNKAFESFNGQLPRSQQTARDFVGHGTHTLSTAGGNFVPGASIFGIGNGTVKGGSPRSRVATYKVCWSLTDAESCFGADVLAAIDQAISDGVDLISVSAGGETSTSSEAIFTDEVSIGAFHALARNILLVASAGNDGPTPGSVVNVAPWVFTVAASTLDRDFSSNITIGNKTITGASLFVNLPPNQSFTVVNAVDAKFANATSRDAQFCRPGTLNPSKVKGKIVACVREGKVKSVSEGQEALSAGAKGVILKNQPKVSGRTLLSEPHVLSTISWHEDHPKTRQHSIDLIPTDIKSGTKIRMSQAKVLYGRKPAPVMASYSSRGPNKVQPSILKPDVTAPGVNILAAYSLFASASNLLTDTRKGFPFNVMQGTSMSCPHVVGTAGLIKTLHPNWSPAAIKSAIMTTATTRDNTNRPITDTFENTLANPFAYGSGHIRPNNAIDPGLVYDLTIIDYLNFLCASGYNQQLISSLNFNMTFKCSGSHSINDLNYPSITLPNLGLNVVNVTRTVTNVGPPSTYFVKAQLPGYKISVVPNSLNFKKIGEKKTFQVSLQATNVTPRRKYQFGELKWSNGKHIVRSPITVRRK 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02247 787 ProSitePatterns Serine proteases, subtilase family, serine active site. 573 583 IPR023828 -
Trre13g02247 787 PRINTS Subtilisin serine protease family (S8) signature 572 588 IPR015500 -
Trre13g02247 787 PRINTS Subtilisin serine protease family (S8) signature 143 162 IPR015500 -
Trre13g02247 787 PRINTS Subtilisin serine protease family (S8) signature 223 236 IPR015500 -
Trre13g02247 787 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 34 784 IPR045051 -
Trre13g02247 787 CDD PA_subtilisin_like 367 474 - -
Trre13g02247 787 FunFam Subtilisin-like protease SBT1.5 145 372 - -
Trre13g02247 787 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 118 IPR037045 -
Trre13g02247 787 Gene3D - 660 786 - -
Trre13g02247 787 Gene3D Peptidase S8/S53 domain 146 656 IPR036852 GO:0004252|GO:0006508
Trre13g02247 787 Pfam Subtilase family 143 616 IPR000209 GO:0006508|GO:0008236
Trre13g02247 787 CDD Peptidases_S8_3 115 609 IPR034197 -
Trre13g02247 787 FunFam Subtilisin-like protease SBT5.3 23 118 - -
Trre13g02247 787 Pfam Fibronectin type-III domain 689 784 IPR041469 -
Trre13g02247 787 Pfam Peptidase inhibitor I9 34 118 IPR010259 -
Trre13g02247 787 ProSiteProfiles Serine proteases, subtilase domain profile. 122 643 - -
Trre13g02247 787 Gene3D - 361 510 - -
Trre13g02247 787 SUPERFAMILY Subtilisin-like 117 647 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02247 Trre-Chr13 19911315 19918446 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02247 34 785 Subtilisin-like Serine Gene Family AT2G04160 52.163 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02247 - - gmx:100803751 1249.96