Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02244 ATGGGTCGCTCAATATTTTGTCTTCATCACCTTCTTTTTACATCTCTTCTTATTTTCACTTTGTTGCTCAATGATGCTCATGCCAACAAAAAGTGTTACATTGTATACTTGGGAGCACATTCACATGGTCCAACTCCTTCCACTGTTGATCTTAAAATTGCTACATCTTCTCATTATGATTTATTGGGTTCAATCTTCGGAAGTGAAGAGAAAGCAAAAGAAGCAATAATTTATTCATATAATAAACAGATCAATGGCTTTGCAGCTCTACTTGAAGAGGAAGAAGCTGCACAAATTTCAAAAAACCCGAAGGTTGTATCTGTGTTCTTGAGTAAAAAACATAAACTACACACTACACGTTCATGGGAATTTCTTGGATTGCGTGGAAATGATATGAACTCGGCTTGGCAAAAAGGAAGGTTTGGTGAAAATACCATCATAGCTAACATTGATTCAGGTGTTTGCCCCGAATCGAAGAGTTTTAGCGACAGAGGAATAGGCCCAATTCCAGCAAAATGGCGTGGGCGTGGGGGTAATATTTGTCAAATTAACAAACTCAAAGGTTCTAACAAAGTTCCATGTAACAGGAAGCTAATTGGAGCAAGATTTTTCAACAAAGCATATGAGCACGATAACGGAAAACTTCCCCGTTCACAACAAACAGCACGTGACTTTGTAGGCCACGGTACTCACACCCTATCAACAGCAGGTGGAAACTTCGTACCAGGTGCAAGTATATTTGGTATTGGTAACGGTACTGTAAAAGGTGGTTCACCAAGATCAAGAATCGCAACCTATAAAGTGTGTTGGTCTCTAACAGATCCTGATAGTTGCTATGGTGCCGATGTATTAGCTGCTATTGAACAAGCCATTAATGATGGTGTTGATTTAATTTCAGTTTCTATTAGTGGCAGCATTAGTACAGATTCTAAAGAAATATTTAACGATCCGGTTTCAATAGGTGCATTTCATGCACTTGCTAGAAATATATTATTAGTTGCCTCAGCTGGAAATGATGGACCTACCCCTGGAAGTGTTGTTAATGTTGCCCCTTGGGTGTTCACAGTTGCTGCTAGCACAATTGATAGAGATTTCAGCAGTACCATCACCGTTGGTAACGAAACAATCCGGGGAGCAAGTCTTTTTGTAACCTTGCCACCTAATCAGTCTTTTACCGTAGTGACTTCTACCGATGGTAAATTTGCCAATGTGACAAATCGTGATGCTCGATTTTGTAGACCGGGAACACTTGATCCTGCAAAAGTGAATGGTAAAATAGTGTCGTGTGTTCGAGAAGGGAAAATAAAATCAGTTGCTGAGGGTCAAGAAGCTTTATCTGCAGGTGCAAAGGGAGTGATTCTGGAAAATCAACCTAAAATTAGTGGGAGAACACTTCTTTCTGAGCCTCATGTTTTGTCTACTGTTGGCGTGAGCAGACGAAAAAAGAATACAACACGACAGGGACACACAACTGCCACGTCGGGTACTAAAATAAGATTGTCCCAAGCAAAAGTATTATACGGAAGAAAGCCAGCTCCAGTTATGGCTTCATACTCATCTAGGGGACCAAATAAAGTTCAACCATCAATACTTAAGCCTGATGTAACTGCGCCAGGTGTAAACATACTTGCTGCATATTCATTGTTTGCAAGTGCATCTAATTTAATTACAGACACTCGTCGAGGTTTTCCATTCAATGTCATGCAAGGAACTTCAATGGCTTGTCCTCATGTCGCTGGCACTGCCGGACTTATCAAAACACTTCATCCTAATTGGAGTCCAGCAGCTATTAAATCCGCTATCATGACCACTGCAACCACAAGAGATAACACCAAGAAGCCAATAAGGGATGCATTTGATAAAAAACTAGCAAATCCATTTACATATGGTTCAGGACACATTCAACCCAACAGTGCAATAGATCCAGGACTTGTTTATGATCTAACCATTATTGATTACTTAAATTTCTTATGTGCTTCTGGATACAAACAAAAACTCATCACAAAACTTAATTTCAACATGACATTTAAATGTTCAGGGTCACATAGCATAAATGACTTGAATTACCCTTCAATCACATTACCAAATCTTGGGTTAAATGTTGTTAATGTGACTAGGACAGTTACCAATGTTGGGCCACCAAGTACATATTTTGTAAAAGCACAATTGCCTGGATATAAAATTAGTGTTGTACCAAATTCCTTGAATTTCAAGAAAACTGGTGAAAAGAAGACATTTCAAGTTAGTGTGCAAGCAAGAAGTGTGACTCGAAGGAGGAAAAAATACCAATTTGGTGAATTGAAATGGTCAAATGGAAAACACATTGTTAGGAGTCCAATTACTGTTCGACGCAAATGA 2358 0.3914 MGRSIFCLHHLLFTSLLIFTLLLNDAHANKKCYIVYLGAHSHGPTPSTVDLKIATSSHYDLLGSIFGSEEKAKEAIIYSYNKQINGFAALLEEEEAAQISKNPKVVSVFLSKKHKLHTTRSWEFLGLRGNDMNSAWQKGRFGENTIIANIDSGVCPESKSFSDRGIGPIPAKWRGRGGNICQINKLKGSNKVPCNRKLIGARFFNKAYEHDNGKLPRSQQTARDFVGHGTHTLSTAGGNFVPGASIFGIGNGTVKGGSPRSRIATYKVCWSLTDPDSCYGADVLAAIEQAINDGVDLISVSISGSISTDSKEIFNDPVSIGAFHALARNILLVASAGNDGPTPGSVVNVAPWVFTVAASTIDRDFSSTITVGNETIRGASLFVTLPPNQSFTVVTSTDGKFANVTNRDARFCRPGTLDPAKVNGKIVSCVREGKIKSVAEGQEALSAGAKGVILENQPKISGRTLLSEPHVLSTVGVSRRKKNTTRQGHTTATSGTKIRLSQAKVLYGRKPAPVMASYSSRGPNKVQPSILKPDVTAPGVNILAAYSLFASASNLITDTRRGFPFNVMQGTSMACPHVAGTAGLIKTLHPNWSPAAIKSAIMTTATTRDNTKKPIRDAFDKKLANPFTYGSGHIQPNSAIDPGLVYDLTIIDYLNFLCASGYKQKLITKLNFNMTFKCSGSHSINDLNYPSITLPNLGLNVVNVTRTVTNVGPPSTYFVKAQLPGYKISVVPNSLNFKKTGEKKTFQVSVQARSVTRRRKKYQFGELKWSNGKHIVRSPITVRRK 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02244 785 PRINTS Subtilisin serine protease family (S8) signature 569 585 IPR015500 -
Trre13g02244 785 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Trre13g02244 785 PRINTS Subtilisin serine protease family (S8) signature 224 237 IPR015500 -
Trre13g02244 785 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 117 IPR037045 -
Trre13g02244 785 CDD Peptidases_S8_3 114 606 IPR034197 -
Trre13g02244 785 CDD PA_subtilisin_like 368 478 - -
Trre13g02244 785 Gene3D Peptidase S8/S53 domain 145 653 IPR036852 GO:0004252|GO:0006508
Trre13g02244 785 ProSitePatterns Serine proteases, subtilase family, serine active site. 570 580 IPR023828 -
Trre13g02244 785 Pfam Subtilase family 142 608 IPR000209 GO:0006508|GO:0008236
Trre13g02244 785 Pfam Fibronectin type-III domain 686 782 IPR041469 -
Trre13g02244 785 ProSiteProfiles Serine proteases, subtilase domain profile. 121 640 - -
Trre13g02244 785 Gene3D - 657 784 - -
Trre13g02244 785 FunFam Subtilisin-like protease SBT1.5 144 383 - -
Trre13g02244 785 Gene3D - 362 507 - -
Trre13g02244 785 FunFam Subtilisin-like protease SBT5.3 22 117 - -
Trre13g02244 785 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 782 IPR045051 -
Trre13g02244 785 Pfam Peptidase inhibitor I9 33 117 IPR010259 -
Trre13g02244 785 SUPERFAMILY Subtilisin-like 116 644 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02244 Trre-Chr13 19834885 19842961 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02244 20 783 Subtilisin-like Serine Gene Family AT5G59810 50.324 0.0 724
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02244 - - gmx:100803751 1191.02