Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02242 ATGGGTGGTTCCCTATTTTCTCTTCAAATTATTGTTTCATTACTTTTCATTTTGTTGTTCTTGCTAGAAGCCGTCCATGGCACCAAAAAGTGTTACATTGTATACTTGGGAGCACATTCTCATGGTCCTCACCCTACATCTGCTGAACTTGAAAGTGCTACCAATTCTCATTATGATTTACTAAGTTCAACCTTGGGAAGCCGGGAGAAAGCGAAAGAAGCAATGATTTATTCATATAACAAACACATCAATGGCTTTGCTGCGTTACTTGAAGAGGAACAAGCATCATATATTGCAAAAAAAGCAAATGTAGTGTCAGTGTTCTTGAGCAAATCACATAAACTACACACTACTCGGTCATGGGAATTTCTTGGACTGCAAAGAAATGGTAAAAACACTGCATGGCAAAAGGGGAAGTATGGTGAAAATACAATAATCGCAAACATTGACTCGGGTGTTTGGCCGGAATCCCAGAGCTTCAGTGATAACGGATATGGACCTATTCCATCAAAATGGCGGGGGAGAAATGCGTGTCAAATTAGACAATTTGGCAAATTGAAGAAAAATCCTTGCAACAGGAAGTTAATTGGAGCCAGATTCTTCAGCAATGCTTACGAGGCATATAATGGAAAGCTTCACCCATCGCTACTTACCGCACGTGACTTTGTAGGCCACGGTACTCATACTCTATCAACAGCCGGTGGAAACTTTGTTCCAGGTGCAAGTATATTTGCCATTGGCAATGGAACTGTAAAAGGTGGTTCACCAAGTGCTAGAGTTGCAACCTACAAAGTGTGCTGGTCTCTAACAGATGTTGCTGATTGCTTTGGAGCTGATGTGTTAGCTGCTATTGACCAAGCCATTAGTGATGGAGTTGATATAATCTCACTTTCAGCTGCTGGCCAATATCTTGTCCATCCTGAAGATATTTTCACAGATGAGGTTTCAATAGGTGCATTCCATGCACTTTCTAGAAACATATTATTAGTTGCCTCTGCGGGGAACGATGGACCCACCGCAGGAAGCGTGGTCAATATAGCTCCATGGGTATTCACAATTGCTGCAAGTACATTAGACAGAGACTTCAGCAGTACTATAACTTTTGGTAACAGTCAACAAGTGATGGGAGCCAGTCTTTTTGTAACCTTGCCACCAAACAAGGCATTTTCTCTGATTCTTGCTACGGATGGTAAACTTGCCAATGCAACAAACCGTGATGCACGACTTTGTAGGCCTGGAACACTTGATCCTTCAAAAGTGAAGGGGAAAATAGTGGGATGTGATCGAGAATTGAATATAAAATCAGTTGCTGAAGGTCAAGAAGCTTCAATAGCAGGTGCAAAGGGAATGCTTTTGAGCAATCGACCACAACAAGGGAAAACAAGTCTTGCTGAACCTCATGTTTTGTCTACTGTGACTACGCATCAATTGGGAAACAAGTACAACCCTCCTGCTGCACCAGAACGAGCAGGGTCACATGCTCCTGCTTTTGACATAACTTCCATGGACTCTAAATTAAAGTCGGGTACTACAATAAGGTTTTCAGGAGCAAAAACATTCTATGGAAGAAAGCCAGCTCCAGTAATGGCTTCATTCTCATCTAGAGGACCAAATAAGATTCAGCCATCAATACTCAAGCCGGATGTAACTGCACCAGGTGTGAACATACTTGCTGCCTATTCACTGTTCGCAAGTGCATCCAACTTACTAACAGATAATCGCAAAGGCTTTCCATTCAATGTAATGCAAGGAACTTCTATGTCTTGCCCTCATGTGGCCGGCATTGCAGGACTTCTCAAAACAAAGCATCCTGATTGGAGTCCAGCAGCTATTAAATCAGCTATCATGACCACAGCAACCACACTAGATAACACAAACAGGCCGATTCAAGATGCATTTGAAAAAAAACTAGCAACTCCCTTTGCTTATGGTTCAGGGCATGTTCAACCTGACCTTGCAATAGATCCTGGACTTGTTTATGATCTAGGCATTAAGGATTACTTGAATTTCCTATGTGCTTATGGATACGACCAACAACTCATTTCAGCACTTAATTTCAACGGTACATTTGTTTGTTCCGGATCTCACAGCATAGAAGACTTTAACTACCCTTCAATCACCTTACCGAATCTTGAGTTAAATGCCGTTAACGTCACTCGGACAGTCACCAATGTTGGGCCACCAAGCACATATGTAGCAAAAGTCCAATTGCCCGGATATAAAATTGTCGTTGTACCAAACTCTTTGACTTTCAAGAAAATTGGTGAAAAGAAGACATTCCAAGTTATTGTGCAGGCAACAAATGTGACTCCACGAAAGAAATATCAATTTGGAAATTTGCAATGGACAGATGGAAAACACATCGTAAGGAGTCCTATCACAGTTAAGCGCAAATAA 2397 0.4164 MGGSLFSLQIIVSLLFILLFLLEAVHGTKKCYIVYLGAHSHGPHPTSAELESATNSHYDLLSSTLGSREKAKEAMIYSYNKHINGFAALLEEEQASYIAKKANVVSVFLSKSHKLHTTRSWEFLGLQRNGKNTAWQKGKYGENTIIANIDSGVWPESQSFSDNGYGPIPSKWRGRNACQIRQFGKLKKNPCNRKLIGARFFSNAYEAYNGKLHPSLLTARDFVGHGTHTLSTAGGNFVPGASIFAIGNGTVKGGSPSARVATYKVCWSLTDVADCFGADVLAAIDQAISDGVDIISLSAAGQYLVHPEDIFTDEVSIGAFHALSRNILLVASAGNDGPTAGSVVNIAPWVFTIAASTLDRDFSSTITFGNSQQVMGASLFVTLPPNKAFSLILATDGKLANATNRDARLCRPGTLDPSKVKGKIVGCDRELNIKSVAEGQEASIAGAKGMLLSNRPQQGKTSLAEPHVLSTVTTHQLGNKYNPPAAPERAGSHAPAFDITSMDSKLKSGTTIRFSGAKTFYGRKPAPVMASFSSRGPNKIQPSILKPDVTAPGVNILAAYSLFASASNLLTDNRKGFPFNVMQGTSMSCPHVAGIAGLLKTKHPDWSPAAIKSAIMTTATTLDNTNRPIQDAFEKKLATPFAYGSGHVQPDLAIDPGLVYDLGIKDYLNFLCAYGYDQQLISALNFNGTFVCSGSHSIEDFNYPSITLPNLELNAVNVTRTVTNVGPPSTYVAKVQLPGYKIVVVPNSLTFKKIGEKKTFQVIVQATNVTPRKKYQFGNLQWTDGKHIVRSPITVKRK 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02242 798 Gene3D - 671 797 - -
Trre13g02242 798 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 116 IPR037045 -
Trre13g02242 798 Gene3D - 359 521 - -
Trre13g02242 798 Gene3D Peptidase S8/S53 domain 144 667 IPR036852 GO:0004252|GO:0006508
Trre13g02242 798 PRINTS Subtilisin serine protease family (S8) signature 583 599 IPR015500 -
Trre13g02242 798 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
Trre13g02242 798 PRINTS Subtilisin serine protease family (S8) signature 221 234 IPR015500 -
Trre13g02242 798 ProSiteProfiles Serine proteases, subtilase domain profile. 120 654 - -
Trre13g02242 798 FunFam Subtilisin-like protease SBT1.5 143 374 - -
Trre13g02242 798 CDD Peptidases_S8_3 113 620 IPR034197 -
Trre13g02242 798 Pfam Peptidase inhibitor I9 32 116 IPR010259 -
Trre13g02242 798 ProSitePatterns Serine proteases, subtilase family, serine active site. 584 594 IPR023828 -
Trre13g02242 798 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 795 IPR045051 -
Trre13g02242 798 FunFam Subtilisin-like protease SBT5.3 21 116 - -
Trre13g02242 798 CDD PA_subtilisin_like 365 472 - -
Trre13g02242 798 Pfam Subtilase family 141 625 IPR000209 GO:0006508|GO:0008236
Trre13g02242 798 Pfam Fibronectin type-III domain 700 795 IPR041469 -
Trre13g02242 798 SUPERFAMILY Subtilisin-like 115 658 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02242 Trre-Chr13 19775875 19784723 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02242 32 796 Subtilisin-like Serine Gene Family AT2G04160 51.102 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02242 - - gmx:100813564 1188.33