Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02239 ATGTTACAAATGAAAGGATCCAACCATACACATTATATTTATAATTGCAAGGACTCTAAATTAAAGTCGGGTACTACAATAAGGTTTTCAGGAGCAAAAACATTCTATGGAAGAAAGCCAGCTCCAGTAATGGCTTCATTCTCATCTAGAGGACCAAATAAGATCCAGCCATCAATACTCAAGCCCGATGTAACGGCACCAGGTGTGAATATACTTGCTGCCTATTCATTGTTTGCAAGTGCATCCAACTTAGTAACAGACAATCGCAAAGGTTTTCCATTCAATGTAATGCAAGGAACTTCTATGTCTTGCCCTCATGTGGCTGGCATTGCAGGACTTCTCAAAACATTGCATCCTAATTGGAGTCCAGCAGCTATTAAATCTGCTATTATGACCACAGCAACCACACTAGATAACACGAACAGGCCAATTCAGGATGCATTTGAAAACAAGCTAGCAACTCCCTTTGCTTATGGATCAGGGCATGTTCAACCAGACCTTGCAATAGATCCTGGACTTGTTTATGATCTAGGCATTACGGATTACTTGAATTTCCTATGTGCTTATGGATACGACCAACAACTCATTTCAGCACTTATTTTGAACGGTACATTTGTTTGTTCCGCATCTCACAGCATAGAAGACTTTAACTACCCTTCAATCACCTTACCAAATCTTGGGTTAAATGCCGTTAATGTCAGTCGGACAGTCACCAATGTTGGATCACCAGCCACATATGTAGTAAAAGCCCAATTGCCCGGATATAAAATTGTCGTTGTACCAAACTCCTTGACTTTCAAGAAAATTGGTGAAAAGAAGACATTCCAAGTTATTGTGCAGGCAACAAATGTGACTCCACGGAAGAAATATCAATTTGGAAATTTGCAATGGACAGATGGAAAACACATTGTAAGGAGTCATATGACAGTTAAGCGCAACTAA 942 0.3981 MLQMKGSNHTHYIYNCKDSKLKSGTTIRFSGAKTFYGRKPAPVMASFSSRGPNKIQPSILKPDVTAPGVNILAAYSLFASASNLVTDNRKGFPFNVMQGTSMSCPHVAGIAGLLKTLHPNWSPAAIKSAIMTTATTLDNTNRPIQDAFENKLATPFAYGSGHVQPDLAIDPGLVYDLGITDYLNFLCAYGYDQQLISALILNGTFVCSASHSIEDFNYPSITLPNLGLNAVNVSRTVTNVGSPATYVVKAQLPGYKIVVVPNSLTFKKIGEKKTFQVIVQATNVTPRKKYQFGNLQWTDGKHIVRSHMTVKRN 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02239 313 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 11 308 IPR045051 -
Trre13g02239 313 Gene3D - 186 312 - -
Trre13g02239 313 Gene3D - 23 36 - -
Trre13g02239 313 SUPERFAMILY Subtilisin-like 41 173 IPR036852 GO:0004252|GO:0006508
Trre13g02239 313 ProSiteProfiles Serine proteases, subtilase domain profile. 1 169 - -
Trre13g02239 313 Pfam Subtilase family 42 140 IPR000209 GO:0006508|GO:0008236
Trre13g02239 313 Pfam Fibronectin type-III domain 215 310 IPR041469 -
Trre13g02239 313 ProSitePatterns Serine proteases, subtilase family, serine active site. 99 109 IPR023828 -
Trre13g02239 313 Gene3D Peptidase S8/S53 domain 37 182 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02239 Trre-Chr13 19745773 19746891 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02239 32 311 Subtilisin-like Serine Gene Family AT2G04160 56.738 4.04e-98 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02239 - - tpra:123892266 555.058