Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02238 ATGGGCGCCGTCCATGGCACCAAAAAGTGTTACATTGTATACTTGGGAGCACATTCTCATGGTCCTCACCCTACATCTGCTGAACTTGAAATTGCTACCAATTCTCATTATGATTTACTAAGTTCAACCTTGGGAAGCCGGGAGAAAGCGAAAGAAGCAATGATTTATTCATATAACAAACACATCAATGGCTTTGCTGCATTGCTTGAAGAGGAACAAGCATCATATATTGAAAAAAAGGCAAATGTAGTGTCAGTGTTCTTGAGCAAATCACATAAACTACACACTACACGGTCATGGGAATTTCTTGGACTGCAAAGAAATGGTAAGAACACTGCATGGCAAAGGGGGAGGTTTGGTGAAAACACAATAATCGCAAACATTGACTCTGGTGTATGGCCAGAATCCAAAAGTTTTAACGCCAAAGGATTTGGCCCTATCCCATCAAAATGGCGGGGAGGAAAAGCATGTCAAATTAGTCAATTCGGAAACCTTAAGAAAAATCCTTGCAACAGGAAGCTAATTGGAGCCAGATTCTTCAGTAATGCTTATGAAGCTTACTATGGCAAACTTCACCCATCGCTACTTACTGCACGTGACTTTGTTGGCCACGGTACTCATACTCTATCAACAGCCGGTGGAAACTTTGTTCCAGGTGCAAGTATATTTGCTATTGGCAATGGTACCGTAAAAGGTGGTTCACCAAGAGCTAGAGTTGCAACCTACAAAGTGTGCTGGTCTCTAACAGATGTTGCTGATTGCTTTGGAGCTGATGTGTTAGCTGCTATTGACCAAGCCATTAGTGATGGAGTTGATATAATCTCACTTTCAGCTGCTGGCCAATATCTTGTCCATCCTGAAGATATTTTCACAGATGAGGTTTCAATCGGTGCATTCCACGCACTTTCTAGAAACATATTATTAGTTGCCTCTGCAGGGAACGATGGACCCACCGCAGGAAGCGTGGTGAATATAGCTCCATGGGTATTCACAATTGCTGCTAGTACATTAGACAGAGACTTCAGCAGTACTATAACTTTTGATAACAATCAACAAGTGACGGGAGCCAGTCTTTTTGTAAACTTGCCACCAAACCAAGCATTTTCTCTGATTCTTGCTACGGATGGTAAACTTGCCAATGCAACAAACCGTGATGCACGACTTTGTAGGCCTGGAACACTTGATCCTTCAAAAGTGAAGGGGAAAGTAGTGGCATGCGATCGAGAAGGAAATATAAAATCAGTTGTTGAGGGCCAGGAAGCTTCATCAGCTGGCGCAAAGGGAATGCTTTTAAGCAATCGACCACAACAAGGGAAAACAAGTCTTGCCGAGCCTCATGTTTTGTCTTGTGTGACTCGACCACATAATGAAAGCAAGTACAACCCACCTGCTGCACCAGAACGAGCAGGGTCACATTCACCTGCTTATGACATAACTTCCATGTAA 1446 0.4308 MGAVHGTKKCYIVYLGAHSHGPHPTSAELEIATNSHYDLLSSTLGSREKAKEAMIYSYNKHINGFAALLEEEQASYIEKKANVVSVFLSKSHKLHTTRSWEFLGLQRNGKNTAWQRGRFGENTIIANIDSGVWPESKSFNAKGFGPIPSKWRGGKACQISQFGNLKKNPCNRKLIGARFFSNAYEAYYGKLHPSLLTARDFVGHGTHTLSTAGGNFVPGASIFAIGNGTVKGGSPRARVATYKVCWSLTDVADCFGADVLAAIDQAISDGVDIISLSAAGQYLVHPEDIFTDEVSIGAFHALSRNILLVASAGNDGPTAGSVVNIAPWVFTIAASTLDRDFSSTITFDNNQQVTGASLFVNLPPNQAFSLILATDGKLANATNRDARLCRPGTLDPSKVKGKVVACDREGNIKSVVEGQEASSAGAKGMLLSNRPQQGKTSLAEPHVLSCVTRPHNESKYNPPAAPERAGSHSPAYDITSM 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02238 481 FunFam Subtilisin-like protease SBT5.3 2 95 - -
Trre13g02238 481 Pfam Peptidase inhibitor I9 11 95 IPR010259 -
Trre13g02238 481 Pfam Subtilase family 120 374 IPR000209 GO:0006508|GO:0008236
Trre13g02238 481 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 2 95 IPR037045 -
Trre13g02238 481 ProSiteProfiles Serine proteases, subtilase domain profile. 99 481 - -
Trre13g02238 481 Gene3D - 338 453 - -
Trre13g02238 481 SUPERFAMILY Subtilisin-like 94 356 IPR036852 GO:0004252|GO:0006508
Trre13g02238 481 CDD Peptidases_S8_3 92 337 IPR034197 -
Trre13g02238 481 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 11 453 IPR045051 -
Trre13g02238 481 MobiDBLite consensus disorder prediction 453 481 - -
Trre13g02238 481 CDD PA_subtilisin_like 344 451 - -
Trre13g02238 481 Gene3D Peptidase S8/S53 domain 123 337 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02238 Trre-Chr13 19738319 19745698 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02238 8 448 Subtilisin-like Serine Gene Family AT5G59810 51.011 3.76e-147 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02238 - - gmx:100813564 721.85