Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02217 ATGTCTCGTGCTCAACATGGCCTATCCAAAAATTCTGCTTCTTTGTTGGATGCTGGTTTGCCAGTATCAACCAAAGGAGGTGATCATCATTGCCAGGCCAGTGAACCAAGAATGGTTGATCCCTCTGTTCCACCGCATGTTCCACCACATGTTCATCAGCCTGTTGATGATTTTCTTACTGCCATACAGACATATCATTTGGAATTTGATGTTGAAAATTTAGTAGGGAGATTGCCTGCATGTTTTGTTCGTGAATTTGGAAAGGATGTTTCTGAATATGTCATTTTGAGAGATCCTAACCACAATGAGTTCGAGGTTCAAGTCGTAAAAAAGGTAAATGAGATCTATTTTGGTGATGGATGGCACAGTCTCAAGGATGCTTATGACATAAAGTTTGGTGCTTGGGTTAGTGTTTGCTACATTAGTCCTGTACTTTTTACTATGAGAGTTTTGAGTAGGTGGTGTTTTGAGATTAGTTATCCTTATTATGACCCCCCTCTTAGGCATCTTTTGGCTAGGAGTGATCCTCGCAGTGGGATTGGTTCATCTGTCATGAATTTTTGTGCAGCTGGTTCCGCGCGCCAAAAATCACTTATACGTTCTTATGTCAAAGATTTAACACTTCACGATATACACTCCGGTGTCTTGGTTTTGCCTTGGCAAGGATTTGGTGATTCTGCCTTTGCGTTTGTGTTTTCTGATTTGATTTTGGTGGATAACAGCGGAAAGCAGTACAAGTGTGGTGTCAAGTTTGGTGTTGATGTTGGTGGTGAATTGGCATGCAATGTGTCTGGTGGTTGGCGTGATCTGTGTGCAAATCATGGTTTGGTTGAGGGTAACAGGGTTAAATTTAGTGTTGCACATTTTTCTGCTAGCAATGTCATGTATGTTTCGATATATCCACGGGTTCGGGTAGAGGACTATTTGAATATGGGTGATCTTGATGATTAG 951 0.4143 MSRAQHGLSKNSASLLDAGLPVSTKGGDHHCQASEPRMVDPSVPPHVPPHVHQPVDDFLTAIQTYHLEFDVENLVGRLPACFVREFGKDVSEYVILRDPNHNEFEVQVVKKVNEIYFGDGWHSLKDAYDIKFGAWVSVCYISPVLFTMRVLSRWCFEISYPYYDPPLRHLLARSDPRSGIGSSVMNFCAAGSARQKSLIRSYVKDLTLHDIHSGVLVLPWQGFGDSAFAFVFSDLILVDNSGKQYKCGVKFGVDVGGELACNVSGGWRDLCANHGLVEGNRVKFSVAHFSASNVMYVSIYPRVRVEDYLNMGDLDD 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02217 316 Gene3D - 56 155 IPR015300 -
Trre13g02217 316 SUPERFAMILY DNA-binding pseudobarrel domain 200 290 IPR015300 -
Trre13g02217 316 SUPERFAMILY DNA-binding pseudobarrel domain 77 151 IPR015300 -
Trre13g02217 316 MobiDBLite consensus disorder prediction 18 37 - -
Trre13g02217 316 PANTHER B3 DOMAIN-CONTAINING 57 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02217 Trre-Chr13 19573482 19574618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02217 77 313 REM Transcription Factor Family AT4G31690 21.577 2.16e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02217 - - tpra:123904251 260.766