Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02211 ATGGAGAGGGTTGCGGAGCAAAAGGTACTTCCTCGGACCTTGCCTGTTGTGTTCGAGGTATCTGATGCACACACAGCTGTAAAAAGAGAAGCTGGCGGTCAGAGACTAACAGGGAAGGATGTTTCATGTATGCCGGTTTCAGAAAGAGCATTGAATCAGTTTCCAAAAGCATTGAATCGGTTTCAGGATGGCCCTATGACGCGTCTGGCCTCCATTAAGGAAGTGGCACAGTTGTCAAATGCAAGAATTGTTTTGGTAGCGGAGGACATGGGATTCGATACACAGTCCTCGCAAGAACGTGGAAAAGCCTCTTTACCAGAACCTGATATCGAGACATTGAAGAGCAGCTGTGATTCTTTTGGGGAAATCGATCCAAGTTCATTTGCCGGTGCTACTCACCCCCCAGAACCTATTGATATTGATCTCATGCGAACGGTTTATGTACCAATAGGTCAAAACAAATCTGAGTCTGGATGCTTAACGACAAACATGTCTTTGAAGAAGGGTCCTTTCCTAGAAGATCTTTCAATTCGTAATCTCACTAAGAAACCAATCCTAGCTGTTGTTTCTTCTTCAGAAAGCACGGTTGAAGAATCAAATGGGGACACCGGAAACTTAGTCTCACCGTTTTCAGGCGCTCGTGCATCACAGAATACTGAAAACTCTTTACCTCCTGTAGATTCTGAAGAGAAAGAATGTGTTTGGGATTCTTCTTTGCCTCCAAGTGAAAATGTCAGTCCGCTTAGTAGTATTGACAGTAGTAGTGTTGTCAGAACGATGAGCATTGCTAATAGTTGTGCAAGTACATATCGAAGCGATGCATTCACTAGTGACGGCATGATTAGTATAGACAGGAATTGTGATAGTATTAAAGGAAGTGTAAGAGGAGATTCACTTGAGAGTGCAAAAACTAGTGCGAGTCGAGCAAGTGATAGCAGTGGTCTAAGTGATGACAGCAACTGGAGTAACATCACTGGCAGTGCCAATAAACCACACAAAGGAAATGATCCTAGGTGGAAGGCTATCCTTGCTGTCCGAACACGGGATGGAATTTTGGGCATGAGTCATTTTAAGTTACTCAGACGACTTGGTTGTGGTGATATCGGAAGTGTGTATCTCTCTGAGCTGAGTGCAACTCGGTGTTATTTTGCAATGAAAGTTATGGACAAGGCATCCCTAGCTGCCAGAAAAAAGTTGATCAGGGCACAGACTGAAAGGGAGATATTGCAGTTGCTCGACCATCCATTTCTGCCTACATTGTATACTCATTTTGAGACTGACAGATTTTCATGTTTGGTAATGGAATACTGTCCCGGTGGTGATCTACACACTTTAAGACAACGGCAACCGGGGAAACATTTCTCGGAATATGCTGCACGCTTTTATGCTGCAGAGGTCCTTTTGGCAATTGAATATCTTCATATGCTTGGAGTTGTTTATCGTGACCTTAAACCTGAAAACGTACTAGTTCGAGAAGATGGTCACATAATGCTCTCAGATTTTGATCTTTCTCTTAGATGTGTTGTTTCACCTACCCTTATCAGAACTCACGACGGAGATCCTTCAAAACGGGCAGGTGGTGGTGCATTCTGTGTCCAGCCTGCTTGTATCGAGCCTACATCTGTATGCATCCAGCCTGCCTGTTTTATGCCTAAGCTTTTTCCTCAAAAAAACAAAAAATCACGGAAGCCTAAAGCTGATCCCGGCTTGACAACTGGCGCACTTCCGGAACTTCTTGCTGAGCCTACAACTGCTCGGTCGATGTCCTTCGTTGGCACTCATGAGTATCTTGCCCCTGAAATCATCAAAGGAGAAGGTCATGGAAGTGCAGTTGACTGGTGGACATTTGGCATATTCTTGCACGAGTTATTGTATGGTAAAACCCCTTTCAAAGGATCAGGAAACCGAGCTACGCTGTTTAACGTAGTAGGGCAGCAGCTAAAGTTTCCCGAATCGCCGGCTACAAGTTATGCCAGCCGTGATCTGATCCGTGGTTTGCTGATGAAGGAGCCGCAGAACCGTCTCGGAGTGAAGAGGGGTGCAACTGAGCTAAAACAGCACCCTTTCTTTGAAGGTGTGAACTGGGCGCTGATTAGGTGCAGCACGCCACCGGAAATTCCAAGACCGATGGAAAGTGAACAACCAGTAAAGTTTGAAGCGGTTAATAATACTGTTGGGGTTGGGAGTAATAGTAAGAAAATGGTTGGTAATACTAATAATGAGGTGAAGTCTGGTGGTGGTAAATATCTTGACTTTGAGTTCTTTTAG 2268 0.4462 MERVAEQKVLPRTLPVVFEVSDAHTAVKREAGGQRLTGKDVSCMPVSERALNQFPKALNRFQDGPMTRLASIKEVAQLSNARIVLVAEDMGFDTQSSQERGKASLPEPDIETLKSSCDSFGEIDPSSFAGATHPPEPIDIDLMRTVYVPIGQNKSESGCLTTNMSLKKGPFLEDLSIRNLTKKPILAVVSSSESTVEESNGDTGNLVSPFSGARASQNTENSLPPVDSEEKECVWDSSLPPSENVSPLSSIDSSSVVRTMSIANSCASTYRSDAFTSDGMISIDRNCDSIKGSVRGDSLESAKTSASRASDSSGLSDDSNWSNITGSANKPHKGNDPRWKAILAVRTRDGILGMSHFKLLRRLGCGDIGSVYLSELSATRCYFAMKVMDKASLAARKKLIRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLAIEYLHMLGVVYRDLKPENVLVREDGHIMLSDFDLSLRCVVSPTLIRTHDGDPSKRAGGGAFCVQPACIEPTSVCIQPACFMPKLFPQKNKKSRKPKADPGLTTGALPELLAEPTTARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFPESPATSYASRDLIRGLLMKEPQNRLGVKRGATELKQHPFFEGVNWALIRCSTPPEIPRPMESEQPVKFEAVNNTVGVGSNSKKMVGNTNNEVKSGGGKYLDFEFF 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02211 755 FunFam serine/threonine-protein kinase D6PK-like 441 508 - -
Trre13g02211 755 SUPERFAMILY Protein kinase-like (PK-like) 339 712 IPR011009 -
Trre13g02211 755 ProSitePatterns Serine/Threonine protein kinases active-site signature. 478 490 IPR008271 GO:0004672|GO:0006468
Trre13g02211 755 FunFam Serine/threonine-protein kinase D6PK-like 355 440 - -
Trre13g02211 755 ProSiteProfiles Protein kinase domain profile. 357 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre13g02211 755 Gene3D Transferase(Phosphotransferase) domain 1 585 708 - -
Trre13g02211 755 FunFam serine/threonine-protein kinase D6PK-like 585 708 - -
Trre13g02211 755 PANTHER FLIPPASE KINASE 1-RELATED 129 714 - -
Trre13g02211 755 MobiDBLite consensus disorder prediction 191 251 - -
Trre13g02211 755 Gene3D Transferase(Phosphotransferase) domain 1 441 508 - -
Trre13g02211 755 CDD STKc_phototropin_like 355 709 - -
Trre13g02211 755 SMART serkin_6 357 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre13g02211 755 Gene3D Phosphorylase Kinase; domain 1 355 440 - -
Trre13g02211 755 MobiDBLite consensus disorder prediction 298 330 - -
Trre13g02211 755 MobiDBLite consensus disorder prediction 191 224 - -
Trre13g02211 755 MobiDBLite consensus disorder prediction 294 334 - -
Trre13g02211 755 Pfam Protein kinase domain 587 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre13g02211 755 Pfam Protein kinase domain 358 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02211 Trre-Chr13 19488359 19492108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02211 1 755 AGC Kinase Gene Family AT2G44830 64.962 0.0 927
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Trre13g02211 Pkinase 2.5e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02211 - - gmx:100800019 1183.7