Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02196 ATGAGTGATTCTTCTGTGAAGAATTTAGCTATTACAGATAAGGTTCAAAAACCTGGTGGTTGTGCTGGCATTTTCTTTCAGCTTATTGATTGGAAGAAGAGACTTGTTAAGAAAAAGATCTTCTCCAAGAAACTTCTCACTCCTGCTCGTGCGAAAAAGTTAAGGGGAGATGAAAAAATGCAAAATTCCAAACTTCACTTGATTGCGAATGAGAATAGTGGAGGTTTCCCGAAAGGTGGGAGTTGTGGTGTAGTTGTAGAGCAAAAGAAGGAAATGCGAGTTCCGAGTTTGGTAGCTAGGTTGATGGGTTTAGATTCTATTCCTGCTGCGCAACGAGAGAAATCGAAGAAAGCTTTGTGTCCTGATTATAGTTGTGGCGATGAGAAAGAGTGTTTGGGAAATGATTGTGAGTTTGATAGGCAAGGAAATGATTTGGAAATGAGAGTTGTAAAGCATGATTCAAGACCTCAGAAGCTTCAGAAAACCGGAGTGTGTGAGAGAAAGGCGGTGACTAGGTTTGGAGCAGAGGCGCTTCATATTAGAAGTGTTTTGTCGCGAGCTAAAAAGTATAACCACAATAATCATCATCATCATCCAAAACTTGCTTCTCCTTTAAAGAGTCCTAGAATTACTTCCGGGAAAAGTGCTTCTCGAAGCTCTAGATTAATAGGAGCGGCTGCCAAAATCTTGGAACCTGGACTGCAGGGGAGTAGAGGTAAAGGCACTCTTATGTATCATGCTTCCGCGTGTCCTCTTAAGACTGGCATTGTAATGGATGTTGCTGGAAATAAGTCAGCGGTTATGCAAAATCAATCCTGTCACGTTTCCAGCACATCTAAACCTTTAATTGGGCAGACTTCTTGCAAAAATTGTGGTAATTTGCTTGATGTAGTTGACTGCAAGGCAGAGGTTAGGGGACCACCCGATGTTCCTCCACCGCTCGTTTCAGATGTGATCACTGCTACCTCGGTGGCATCATCATATAAGGGAAAGTCATTCATTCCTTCTCATGGACAAGAAAGAGATATTGCTCTTCTGAGAAGTCAGGAAAAGTTCTCATCTTATGTTCCTGATGAAGAGGGGAAGAATTATGCACAACAGTCGTGGAATGAACCGACTATAATAAGGATGTCAAGGCCCTGCGAAGGTCCGACTAAATGGAGTTCATCATGCCAACCATTAAGGACTCGAGAGGATGATGCGTCTTCTTTTGCCTATAAACACAAAACACAAGAACCGAAATTAAGTAGTGAAAGCTCTTCATCTGGATCTACAACGTGTAATATGCAAGTAAAAAGAGTTTCATCGTGTGCGAGCAGTGCAAGCGGGACTAAAGACTTTGTTGCGTTGAATAGAAGCGCAAGTGGTAGAACGAGGATGAGGTCACCTACTAAAGTTGATAGTTCCAAATTTGATTTAGAGAAAAAACCTTGTAATAGACAGCATGAGTCCCTGTCTCATGTAAGGACATTTGAGAGGAAAAGGACACCGAATGTCACACCACTCAGAGGCACAGCACCAGCTAATTCAGTTGGTTTGAAACAGAGAAATCTTCGTCGTGATGCAATTAATGGCAAAAGGAGGGACTTTGACTCTTCCTCATTGATCACTTCCAATGTAAAAAATAGAGATGGTCGAGGAGAACCGGTTAAGGTGAGCCACAATAGGAACAATGATGCTGTTTCATTCACATTTAGTCCACCTTTAAAGCAAAAGATGGGAATGCTTGCGGAGCAGGAAAAGATAAATTACAACAATGAGAGGAATAAGTACTTCCAAAGACCTTCACCCTTGAAAGTTGATGGTTTAGGTGCCTTTCTAGAAGAAAAGTTGAAGGAATTAACTTCTCAAGAAAATGACGTAGCACATCAAAAATCAAGTGCTGTGATTCTTCAAGAGCTGATATCTGCTCTAAGTTCAGAACATTTGATCTGTCACGATGGTCATATGCATAATGAAGATGCTAGTTTCCTTTGTGAAGCGAAGCAAGAAAACTTATTAGGAACCTCTTCCAGTGGTAATCATCTCAGCCCCGGATCTGTTCTGGAAGCTTCGTTTTCTTCTAGTAGTCTTGACGAGAGTTCAGGGCGTGGTTTTCACCCTGATTCCGTGAATTTCTCGTATAGTCAGCCGGAGCAATCGGAGCATGATGATGAACTTCTAGATTCTGCAGCATCCTTCAATAAAGGAAGTATAAGCAAGATACTAGCTGTTATTGTCAACCAAATTCCTATGGCGTTACAATGTTTATATTCTTTCGGGACACAATTTACTAGAAGCAATTTCAACAATATGAAGGATGTTCTATTGAATGCTGAATTAGTGCTTCGAATTTCAAATGAACGCAGCGAGGAAGAAATGCCGCAGCTTCTAATTCATCGGTTTCTTCTTAACGAATTGGACACTATGGCAGATGATGCTATGTGGACTGATTTTAATGGTTTTGTCGGTTACGATGATTCCAAATCAAGAAAGATGCTCAAGGGATTTGTCTGTGATTGTGTTATGGAATATCTAGAATCAAATTGTTGCCAATATTTTACCTCTGGATTCAACGCATGGACAAAGCTACCGTTATGTGTAAAAGCCGAGACATTGGTTCAAGAGGTCAAGAGAAAGGCGAAGAAGTGTGCATGTATGACTGAGATGGTACCTGATGAAATAATCGAATGGGAGATGAGTCATTCCCTCGGGAAATGGAATGACTTTGATATTGAAGCATTTGAGGCCGGTGTTGATATTGATGGATACATTCTTCATAGTTTGGTTGATGAAGTTGTTGTAGACCTTGTAGGTTGCAAGCATAGTTCTTATTCCTTTTGA 2823 0.4095 MSDSSVKNLAITDKVQKPGGCAGIFFQLIDWKKRLVKKKIFSKKLLTPARAKKLRGDEKMQNSKLHLIANENSGGFPKGGSCGVVVEQKKEMRVPSLVARLMGLDSIPAAQREKSKKALCPDYSCGDEKECLGNDCEFDRQGNDLEMRVVKHDSRPQKLQKTGVCERKAVTRFGAEALHIRSVLSRAKKYNHNNHHHHPKLASPLKSPRITSGKSASRSSRLIGAAAKILEPGLQGSRGKGTLMYHASACPLKTGIVMDVAGNKSAVMQNQSCHVSSTSKPLIGQTSCKNCGNLLDVVDCKAEVRGPPDVPPPLVSDVITATSVASSYKGKSFIPSHGQERDIALLRSQEKFSSYVPDEEGKNYAQQSWNEPTIIRMSRPCEGPTKWSSSCQPLRTREDDASSFAYKHKTQEPKLSSESSSSGSTTCNMQVKRVSSCASSASGTKDFVALNRSASGRTRMRSPTKVDSSKFDLEKKPCNRQHESLSHVRTFERKRTPNVTPLRGTAPANSVGLKQRNLRRDAINGKRRDFDSSSLITSNVKNRDGRGEPVKVSHNRNNDAVSFTFSPPLKQKMGMLAEQEKINYNNERNKYFQRPSPLKVDGLGAFLEEKLKELTSQENDVAHQKSSAVILQELISALSSEHLICHDGHMHNEDASFLCEAKQENLLGTSSSGNHLSPGSVLEASFSSSSLDESSGRGFHPDSVNFSYSQPEQSEHDDELLDSAASFNKGSISKILAVIVNQIPMALQCLYSFGTQFTRSNFNNMKDVLLNAELVLRISNERSEEEMPQLLIHRFLLNELDTMADDAMWTDFNGFVGYDDSKSRKMLKGFVCDCVMEYLESNCCQYFTSGFNAWTKLPLCVKAETLVQEVKRKAKKCACMTEMVPDEIIEWEMSHSLGKWNDFDIEAFEAGVDIDGYILHSLVDEVVVDLVGCKHSSYSF 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02196 940 MobiDBLite consensus disorder prediction 192 217 - -
Trre13g02196 940 MobiDBLite consensus disorder prediction 383 397 - -
Trre13g02196 940 Pfam Domain of unknown function (DUF4378) 765 925 IPR025486 -
Trre13g02196 940 MobiDBLite consensus disorder prediction 692 711 - -
Trre13g02196 940 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 9 929 - -
Trre13g02196 940 MobiDBLite consensus disorder prediction 692 718 - -
Trre13g02196 940 MobiDBLite consensus disorder prediction 400 414 - -
Trre13g02196 940 MobiDBLite consensus disorder prediction 452 471 - -
Trre13g02196 940 Pfam DUF761-associated sequence motif 87 112 IPR032795 -
Trre13g02196 940 MobiDBLite consensus disorder prediction 380 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02196 Trre-Chr13 19184878 19188561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02196 588 930 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 27.731 3.04e-17 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02196 - - aprc:113861902 1194.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g02196 13 19184878 19188561 Trre13g02196 13 19184878 19188561 ECH