Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02178 ATGTTGCTTGAGGCTTATTTCATGCAAATTGATGGCACATTAAACAAATTAACCACCCTACTAGAATATATCGACGATACTGAAGATTACATTAACATTCAAGTAAGTGTAGTCATAATACCAGGAATGTATATCACGGAGAATGTGGAGGCTTCTAGTATGATACATGATCCAGATAATGGAAAGGTTCTAGAAGATCATGAGCTGTCAGCGAATCAGAGAAAGGGCCCACAGAATATTCATGACAACGAGAGCTGTTTTGCTACCGTTCCTTCGTTTTTGTTTTGCTGTCGTTACTATGTTCGTTGTTGTCGTTGCTGTTTGCTGTTTGATGTGAAAGCAGCGGCGCCGCTGGAGGTTGTTGTAGGTGAGGGTTGCCGCGTCGCCGATGGTCGGATCTGTGCTTTGGCATGTTTACGTGGTTTGTGCAGTGGGGGTTTTTGGAGCAATTTGTTGTGGATAGGCTTGGTAGTGGTGGTGGAGTTATTGATGGGGTTTTATTGCTACGTTGGTGGATTCAGTGTCTTGTTGGTGCTCCGTCGAGTCGTCATGGCTCAATGA 561 0.4421 MLLEAYFMQIDGTLNKLTTLLEYIDDTEDYINIQVSVVIIPGMYITENVEASSMIHDPDNGKVLEDHELSANQRKGPQNIHDNESCFATVPSFLFCCRYYVRCCRCCLLFDVKAAAPLEVVVGEGCRVADGRICALACLRGLCSGGFWSNLLWIGLVVVVELLMGFYCYVGGFSVLLVLRRVVMAQ 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02178 186 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 1 35 IPR039204 -
Trre13g02178 186 Gene3D Magnesium transport protein CorA, transmembrane region 1 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02178 Trre-Chr13 19030809 19042144 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02178 1 35 MRS2 Gene Family AT5G64560 88.571 1.86e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02178 K16075 - cmo:127151157 70.8626