Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02177 ATGACAAGGCTGACTGCCCGGGTTCAAAAAGTCAGAGATGAGCTTGAACAGTTGCTGGATGACGATGATGACATGGCCGACCTATATTTGTCGAGAAAGGCAGGTTCAGCATCACCAGTTAGTGGATCAGGTGCTGCAAATTGGTTCGCTGGCTCCCCAACCATAGGATCAAAGATATCCAGAGCAAGCATTGCACAGTTCGTTTAG 207 0.4831 MTRLTARVQKVRDELEQLLDDDDDMADLYLSRKAGSASPVSGSGAANWFAGSPTIGSKISRASIAQFV 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02177 68 Gene3D Magnesium transport protein CorA, transmembrane region 1 62 - -
Trre13g02177 68 Coils Coil 1 21 - -
Trre13g02177 68 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 1 37 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02177 Trre-Chr13 19029999 19030782 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02177 1 62 MRS2 Gene Family AT5G09720 70.312 9.39e-25 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02177 K16075 - gmx:100786817 96.2857