Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02075 ATGGTTGGGGAATCAAGAAAATGGGTGGTGCTAATAGCAACAATTTGGATACAAGCATTCACTGGAACAAATTTTGATTTTTCATCATACTCATCTGAGCTGAAATCAGTTCTTGATATAACTCAACTTCAACTGAATTGTCTTTCAGTAGCATCAGATATGGGGAAGGCATTTGGTTGGTGTTCTGGTGTCTCACTCATGTATTTTCCATTGTGGGTGGTTTTGTTCATGGCTGCTTTCTTGGGGCTTTTTGGTTATGGCTTCCAATGGCTTCTCATTCAAAGACTCATCACTTTGCCTTATTTTCTGGTATTTTTTCTATGCTTGATTGCAGGCTGCAGCATCAGCTGGTTCAACACCATCTGCTATGTATTATGTATAAAAAATTTCACAACTAACCGTTCACTTGCATTATCTTTAAGCATTAGTTTCAATGGTGTAAGTGCAGCTTTATACACTCTCATTGCAAATGCAATAATCTCAAACAATGACACTCTCTATCTCTTCCTCAATGCCATTGTTCCTCTCCTCATTTCATCATTAGTACTCATTCCAATTCTCCACCAACCACAACCTCAACAACAACATTCCACGGACACACTTCATCGTAGCGATCATGATTCCTTAATTTTTCTTTTCCTCAACATCCTTGCCCTTGTCACAGGCCTCTACCTTCTCTGCCTATATTCTCTTTCCTCGTCCCTAACCGTAGCTCGCGTTATCCTTGTCGGCGCGATTTTTCTCCTAGCAATGCTTTTATTTTTGCCAAGCATTGTGTATTCAAAACAATGGTCTTGTTTCACTCTTCCGACTAACTTTTCGTTATATGAATCGAGTTTCACTCTTGTTGAAAATAATGACGATCGCGAGCTTCACAAAGAACTAATTAGTAAAGAGGATCATGGTTCAAGGAATAATGGTAGTGTTCAAAGCATGATGATTGAGAAGAGTTTATGTTTTGTGAATGTGTTGGAGAAAGAGAAGATTATAATGCTTGGTGAAGAGCATACAACTAAGATGTTGATTCGTAGGTGGGATTTTTGGTTATATTACATTGCTTATTTCTGTGGTGGAACAATTGGATTGGTTTATAGTAACAATTTGGGCCAAATTTCTCAATCACTTGGACATAATTCTATGACAAGTTCTCTTGTGACACTTTACTCCACATGTTCGTTTTTTGGTCGACTTCTTGCAGCTGCACCTGATTTATTCAGCAGCAAGATACACTTTGCAAGAACTGGATGGTTTGCAGCAGCATTGATACCAACACCGATTGCATTCATTTTGCTAGCCATATCCGGAACCAAAACAGCATTGCAATTAGGCACAAGCTTAATTGGATTAAGTTCTGGCTTTGTATTTTCTGCAGCAGTATCTATAACATCAGAGCTATTTGGTCCAAACAGTGTAGGGGTAAACCACAATATCCTCGTCACAAATATTCCTTTAGGGTCATGTCTTTATGGCCTCCTTGCAGCATTGGTTTATGACTCTCATGCCATAAGCACAAGACAATCAATATGGCTCCGCGAGATGTCGTTGTGTATGGGAAGGAAATGCTATTTGCAGACATTTATATGGTGGGGTTGCATTTCAATTGTTGGATTGGTTTCAAGCTTCTTGCTTTTCTTAAGGACTAAGCAAGCTTATGATAGTTTTGAAAGAAATAAAAATAGAAACAGAACACTGATAAATTAG 1701 0.3851 MVGESRKWVVLIATIWIQAFTGTNFDFSSYSSELKSVLDITQLQLNCLSVASDMGKAFGWCSGVSLMYFPLWVVLFMAAFLGLFGYGFQWLLIQRLITLPYFLVFFLCLIAGCSISWFNTICYVLCIKNFTTNRSLALSLSISFNGVSAALYTLIANAIISNNDTLYLFLNAIVPLLISSLVLIPILHQPQPQQQHSTDTLHRSDHDSLIFLFLNILALVTGLYLLCLYSLSSSLTVARVILVGAIFLLAMLLFLPSIVYSKQWSCFTLPTNFSLYESSFTLVENNDDRELHKELISKEDHGSRNNGSVQSMMIEKSLCFVNVLEKEKIIMLGEEHTTKMLIRRWDFWLYYIAYFCGGTIGLVYSNNLGQISQSLGHNSMTSSLVTLYSTCSFFGRLLAAAPDLFSSKIHFARTGWFAAALIPTPIAFILLAISGTKTALQLGTSLIGLSSGFVFSAAVSITSELFGPNSVGVNHNILVTNIPLGSCLYGLLAALVYDSHAISTRQSIWLREMSLCMGRKCYLQTFIWWGCISIVGLVSSFLLFLRTKQAYDSFERNKNRNRTLIN 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02075 566 SUPERFAMILY MFS general substrate transporter 216 549 IPR036259 -
Trre13g02075 566 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 552 - -
Trre13g02075 566 Gene3D MFS general substrate transporter like domains 339 555 IPR036259 -
Trre13g02075 566 Pfam Nodulin-like 7 259 IPR010658 -
Trre13g02075 566 SUPERFAMILY MFS general substrate transporter 6 193 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02075 Trre-Chr13 18060738 18065111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02075 1 558 Nodulin-like Gene Family AT1G31470 54.107 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02075 - - gmx:100804951 836.639