Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02066 ATGGAAACATGGCTAGTGATAACATTTTTGTGCTTAATTTTTTCACTAATTCTAAAATTCATAAGAAACCTTGTCTTCGCTCAATCTCCCCTGCCTCCAGGACCTCCAAAAGTACCCCTCATAGGCACCTTCACATTGCTACAACAATATTTTAAAGATCCTAAAACCCTTCTTCAAAATCTTCATGCCAAATATGGTCCAATCTTCACTCTTCAAATGGGTTCTCACACTGACATTTTCATTGCCAATAGGTTTCTTGCACATCAAGCTTTAATCCAAAATAGTACCATCTTCGCTGATCGCCCTAAGGCTCTTCCGACAAAGAAGATAATTAGCAGCGACCAACATGACATCCTTTTTAGCTTCTACGGTCCCATTTGGCGCCTTTTAAGACGCAACCTCACTTCAAGAATTCTTCACCCTTCGCAGATTAAGTCCTATGCTCAAGCGCGTAAATGGGTGTTAGACATTCTTCTACAACGTCTCAAATATGATTCACATGAAAGAAACTCCAAGGGGGTTTTCGTCGTTGATCATTTTCGATATGGAATGTTTTCCTTGTTGTCTCTCATGTGTTTTGGTGACAAACTGAATGAGAATCAAATAAGAGAAATTGAGGAAAGTCAACGTATCATGCTTCTTAATTTCTCAAGATACAATGTCTTGAATATTTGGCCACCAATTACAAAGATATTGTTTAGGAATCGATGGAGCGAGTTTTTGAATCTAAGACGTGATCAAGAAGCCGTGTTGATTCCTTATATAAACACTCGAAGGAAAATCAAAGAAGAGATATTAAGTAATGGTAGAAAGAACAATGTCAATGACTCAAATGATGAATTTGTTTTGTCATATGTTGATACTTTATTAGATTTGGAGTTTTTGGAGGATGAGAAAAAGACCAAACTTGATGATAGTAAAATTTGCACTTTATGTTCGGAGTTTCTAAATGCGGGAACAGATACAACTTCAACTGCATTGGAATGGATTGTGGCGAATTTGGTGAGGTACCAAGATATACAAGAAAAACTTCTAGAAGAGATTAAAGGGGTAATTGGTGATAATAAAGAAGAGAAGGAAATCATAGAAGAAGATTTGCAAAAGATGCCATATCTTAAAGCTGTAATTTTGGAAGGGTTAAGGCGTCACCCACCGCTACACTATGTTGCTCCTCATAAAGTAACGGAGGAAGTTGTTTTAAATGGTTTTTCGATACCTACTTTTGCGTCTATAAATTTCTTGGTGGCTGAGATAGGGAGAGATTCTTCGGCTTGGGAGGATCCTATGGCATTTAAGCCGGAGAGGTTTATGAATAATAGTACTTTTGATATAATGGGGAGTAAAGAGATAAAGATGATGCCATTTGGAGCGGGAAGGAGAATGTGTCCCGGTTATGGTTTAGCATTGTTGCACTTGGAATATTTTGTAGCCAATTTTGTTTGGAATTTTGAATGGAAAGCTGTAGACGAAAATGAGGTTGATTTGTCAGAGAAGCTACAATTTACAATAGTCATGAAGAACCCTTTGAAGGTTAATCTAATACCTAGGTTTTAG 1554 0.3726 METWLVITFLCLIFSLILKFIRNLVFAQSPLPPGPPKVPLIGTFTLLQQYFKDPKTLLQNLHAKYGPIFTLQMGSHTDIFIANRFLAHQALIQNSTIFADRPKALPTKKIISSDQHDILFSFYGPIWRLLRRNLTSRILHPSQIKSYAQARKWVLDILLQRLKYDSHERNSKGVFVVDHFRYGMFSLLSLMCFGDKLNENQIREIEESQRIMLLNFSRYNVLNIWPPITKILFRNRWSEFLNLRRDQEAVLIPYINTRRKIKEEILSNGRKNNVNDSNDEFVLSYVDTLLDLEFLEDEKKTKLDDSKICTLCSEFLNAGTDTTSTALEWIVANLVRYQDIQEKLLEEIKGVIGDNKEEKEIIEEDLQKMPYLKAVILEGLRRHPPLHYVAPHKVTEEVVLNGFSIPTFASINFLVAEIGRDSSAWEDPMAFKPERFMNNSTFDIMGSKEIKMMPFGAGRRMCPGYGLALLHLEYFVANFVWNFEWKAVDENEVDLSEKLQFTIVMKNPLKVNLIPRF 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02066 517 CDD CYP77_89 64 510 - -
Trre13g02066 517 Pfam Cytochrome P450 32 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g02066 517 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g02066 517 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g02066 517 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g02066 517 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g02066 517 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g02066 517 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g02066 517 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g02066 517 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g02066 517 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g02066 517 FunFam Cytochrome P450 family protein 26 517 - -
Trre13g02066 517 Gene3D Cytochrome P450 26 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g02066 517 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 9 508 - -
Trre13g02066 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Trre13g02066 517 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g02066 517 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g02066 517 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g02066 517 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g02066 517 SUPERFAMILY Cytochrome P450 32 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02066 Trre-Chr13 17990575 17992128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02066 1 516 Cytochrome P450 AT1G64940 55.299 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02066 K24184 - gmx:100816275 713.761