Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02039 ATGTGCAACATATTACAAGCACAAAATTTGAAAACTACGGAAAAGGAAACGATTTCGAAGAAATTTTTGAAGTCCTTGGAGACGGTATTTTCAGTTTTAGGATTTGATCCTAGTTGTCTTTCTATTGATCTCCCTGAAATTTTATTTGAGAGAGCCTTTACTCAAGCAGACAACACATTGTTCATTAGACATATAAAGCCTAAATTCTTTTGGAAGCTGCAAAAATGGCTTCAAATTGGTGAAGAGAAAAAGTTTATAGAGAATGTGAAAATTGTTGATCAATGGTTATATTCAAAAATCAAATCCAAAAAAGAAATGCAAGGAGAAGGAGAACAACAATTTGATTTGATAAGTATTCTTTTGAAACAAAAAAGTATAGGAGATGGAAAAAATCCAATAGATGATGAAAATAAGTTTCTAAGAGACACATCAATTAATTTACTTGCAGCTGGTAGAGACACTATTGGTTCTGCTCTTACTTGGTTTTTTTGGATTGTGGCAACACACCCTTTTGTTGAAGCTAAGATTCTTGAAGAGATTAAAGAAAATTTACCATCAAGAAAGGATAATTGGAAATATTTAAAAGTGGAAGTGCTTAACAAGTTAATTTATTTACATGGAGTTATATGTGAAGTCTTGAGGCTTTATCCACCATTGCCTTTTGAGCATAAATCATCATTGAAATCTGATGTGCTTCCTAGTGGTCATAAGATTAAACCAAATACAACTATATTGTATTCTCTATACTCAGTTGGAAGAATGGAGAAGCTATGGGGAGAAGATTGCTTGCAGTTTAAGCCAGAGAGGTGGATTTCTAAGAAAGGAGGGATTATTCAAGTACCCTCTTATAAGTTCATTGCTTTTAATGCTGGACCAAGGACTTGTTTGGGTAAGGATATAAGCTTTATTGAGATCAAAATGATTGCTGCTTCAATATTGTTGAATTACCAGATTCAAGTGGTGGAAGATCATCCCATACTTCCAAGTATTTCTGTTATCCTACACATGAGACATGGTTTGAAGGTTAATGTGAAAAAAAGAAGCATTTGA 1050 0.3314 MCNILQAQNLKTTEKETISKKFLKSLETVFSVLGFDPSCLSIDLPEILFERAFTQADNTLFIRHIKPKFFWKLQKWLQIGEEKKFIENVKIVDQWLYSKIKSKKEMQGEGEQQFDLISILLKQKSIGDGKNPIDDENKFLRDTSINLLAAGRDTIGSALTWFFWIVATHPFVEAKILEEIKENLPSRKDNWKYLKVEVLNKLIYLHGVICEVLRLYPPLPFEHKSSLKSDVLPSGHKIKPNTTILYSLYSVGRMEKLWGEDCLQFKPERWISKKGGIIQVPSYKFIAFNAGPRTCLGKDISFIEIKMIAASILLNYQIQVVEDHPILPSISVILHMRHGLKVNVKKRSI 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02039 349 Gene3D Cytochrome P450 4 347 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g02039 349 PANTHER CYTOCHROME P450 28 342 - -
Trre13g02039 349 SUPERFAMILY Cytochrome P450 32 347 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g02039 349 Pfam Cytochrome P450 66 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g02039 349 PRINTS P450 superfamily signature 286 295 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g02039 349 PRINTS P450 superfamily signature 150 167 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g02039 349 PRINTS P450 superfamily signature 207 218 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g02039 349 PRINTS P450 superfamily signature 295 306 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g02039 349 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 288 297 IPR017972 GO:0005506|GO:0016705
Trre13g02039 349 PRINTS E-class P450 group I signature 285 295 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g02039 349 PRINTS E-class P450 group I signature 206 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g02039 349 PRINTS E-class P450 group I signature 295 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g02039 349 PRINTS E-class P450 group I signature 139 156 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g02039 349 PRINTS E-class P450 group I signature 159 185 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02039 Trre-Chr13 17655246 17656504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02039 34 348 Cytochrome P450 AT2G23180 46.769 3.87e-107 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02039 - - tpra:123890719 493.041